Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3n08
         (723 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF151708-1|AAB59182.1| 1156|Drosophila melanogaster adducin-like...    30   3.7  
AY069456-1|AAL39601.1|  564|Drosophila melanogaster LD18112p pro...    29   4.8  
AE013599-20|EAA45987.2|  575|Drosophila melanogaster CG17486-PA ...    29   4.8  
AY069445-1|AAL39590.1|  501|Drosophila melanogaster LD15939p pro...    29   6.4  
AE014297-3227|AAF56057.2|  501|Drosophila melanogaster CG6985-PA...    29   6.4  

>AF151708-1|AAB59182.1| 1156|Drosophila melanogaster adducin-like
            protein N4 isoform protein.
          Length = 1156

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +1

Query: 205  TKELEHRLEALEESCKLYWFAAKCNLSTARSAA---LDATLNDLNDIQRRVIKTL 360
            +  + HR  +  E C  Y + A C+LST +  A   L A    LNDI   + K L
Sbjct: 1066 SSSMVHRSNSAPELCHTYSYVAVCDLSTKQDQASPQLPAEGEPLNDILSSLEKEL 1120


>AY069456-1|AAL39601.1|  564|Drosophila melanogaster LD18112p
           protein.
          Length = 564

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +1

Query: 157 RIKTLRSVLEKCQDQKTKELEHRLEA-LEESCKL-YWFAAKCNLSTARSAALDATLNDL 327
           ++   R  L++    + K L + L+  L+ES    +WFA+ C  STAR A + +  ++L
Sbjct: 375 KVNVTRLELQQHLTSRIKHLIYPLDTVLDESLGCAFWFASHCTHSTARVALIGSGADEL 433


>AE013599-20|EAA45987.2|  575|Drosophila melanogaster CG17486-PA
           protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +1

Query: 157 RIKTLRSVLEKCQDQKTKELEHRLEA-LEESCKL-YWFAAKCNLSTARSAALDATLNDL 327
           ++   R  L++    + K L + L+  L+ES    +WFA+ C  STAR A + +  ++L
Sbjct: 386 KVNVTRLELQQHLTSRIKHLIYPLDTVLDESLGCAFWFASHCTHSTARVALIGSGADEL 444


>AY069445-1|AAL39590.1|  501|Drosophila melanogaster LD15939p
           protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 116 LSPRNFRKNGNAMTVSKHYDQFWRNAKTRRRRS 214
           L PR FR   N +  S+ +   WRN  T++ ++
Sbjct: 42  LGPREFRAGENPLKDSRIFHVLWRNQTTKKHKT 74


>AE014297-3227|AAF56057.2|  501|Drosophila melanogaster CG6985-PA
           protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 116 LSPRNFRKNGNAMTVSKHYDQFWRNAKTRRRRS 214
           L PR FR   N +  S+ +   WRN  T++ ++
Sbjct: 42  LGPREFRAGENPLKDSRIFHVLWRNQTTKKHKT 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,324,198
Number of Sequences: 53049
Number of extensions: 630479
Number of successful extensions: 2127
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2126
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)