Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3m19
         (751 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1878|AAF55081.2|  818|Drosophila melanogaster CG7886-PA...   117   2e-26
AY113304-1|AAM29309.1|  818|Drosophila melanogaster AT27185p pro...   116   3e-26
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   5.1  
Z14133-1|CAA78507.1| 1678|Drosophila melanogaster clathrin heavy...    29   8.9  
AY119615-1|AAM50269.1| 1678|Drosophila melanogaster LD43101p pro...    29   8.9  
AE014298-2242|AAS65353.1| 1678|Drosophila melanogaster CG9012-PD...    29   8.9  
AE014298-2241|AAS65352.1| 1678|Drosophila melanogaster CG9012-PC...    29   8.9  
AE014298-2240|AAN09367.1| 1678|Drosophila melanogaster CG9012-PB...    29   8.9  
AE014298-2239|AAF48522.1| 1678|Drosophila melanogaster CG9012-PA...    29   8.9  

>AE014297-1878|AAF55081.2|  818|Drosophila melanogaster CG7886-PA
           protein.
          Length = 818

 Score =  117 bits (281), Expect = 2e-26
 Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 3/195 (1%)
 Frame = +3

Query: 168 SRIFQQCYAKCCKLQNFTPLNNVLPTGNGK--ILDFCVDRIKYADWPPILNALSCDLSLH 341
           SR F   Y + C+ +N TP+  +    N     L+ C D++  +DW  +  AL  DL L 
Sbjct: 38  SRSFHFRYLELCRAKNLTPVPEIRSKSNATTTFLELCGDKLAVSDWQLLTEALHYDLVLQ 97

Query: 342 SISIRCRQPV-KTVLEQIDCDRLAKTVNKRAVILTNFMLNNLVEAIXXXXXXXXXXXXXX 518
            + +R R+   +T ++ ID ++ A+   +R VI T F+ N+LV+AI              
Sbjct: 98  QLVVRLRRTYPQTNIDPIDTEKRARLFRQRPVIYTRFIFNSLVQAIANCVSSNKNLSVLK 157

Query: 519 VEGLPLKIPYLNPLCEAVLLNSSLQHLYFQRCLLGDAGCLAICKAVRCLPNVLTLDLSGC 698
           +EGLPL+  Y+  + +A+  N  L+ + F++  +GD GC  +C   + L  +   DLS C
Sbjct: 158 LEGLPLQDGYIETIAKALADNECLESVSFRKSNIGDKGCEVVCNTAKYLNRIEVFDLSEC 217

Query: 699 ELTMLGASYIAELVK 743
            LT  GA ++A+++K
Sbjct: 218 GLTSKGAEHVADMLK 232


>AY113304-1|AAM29309.1|  818|Drosophila melanogaster AT27185p
           protein.
          Length = 818

 Score =  116 bits (280), Expect = 3e-26
 Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 3/195 (1%)
 Frame = +3

Query: 168 SRIFQQCYAKCCKLQNFTPLNNVLPTGNGK--ILDFCVDRIKYADWPPILNALSCDLSLH 341
           SR F   Y + C+ +N TP+  +    N     L+ C D++  +DW  +  AL  DL L 
Sbjct: 38  SRSFHFRYLELCRAKNLTPVPEIRSKSNATTTFLELCGDKLAVSDWQLLTEALHYDLVLQ 97

Query: 342 SISIRCRQPV-KTVLEQIDCDRLAKTVNKRAVILTNFMLNNLVEAIXXXXXXXXXXXXXX 518
            + +R R+   +T ++ ID ++ A+   +R VI T F+ N+LV+AI              
Sbjct: 98  QLVVRLRRTYPQTNIDPIDTEKRARLFRQRPVIYTRFIFNSLVQAIANCVSSNKNLSVLK 157

Query: 519 VEGLPLKIPYLNPLCEAVLLNSSLQHLYFQRCLLGDAGCLAICKAVRCLPNVLTLDLSGC 698
           +EGLPL+  Y+  + +A+  N  L+ + F++  +GD GC  +C   + L  +   DLS C
Sbjct: 158 LEGLPLQDGYIETIAKALADNECLETVSFRKSNIGDKGCEVVCNTAKYLNRIEVFDLSEC 217

Query: 699 ELTMLGASYIAELVK 743
            LT  GA ++A+++K
Sbjct: 218 GLTSKGAEHVADMLK 232


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +1

Query: 586  PSNTCTSNDACSEMRDVWQSAKRSDVCRTS 675
            P   CTSN  CS+      S K  D C TS
Sbjct: 3888 PGGNCTSNTDCSQAHQCGSSGKCIDPCLTS 3917


>Z14133-1|CAA78507.1| 1678|Drosophila melanogaster clathrin heavy
           chain protein.
          Length = 1678

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +2

Query: 344 YFYTMQAACENCTRTNRLRSTSKNCKQTSC----DFNQFYAE*SRRSDIPTLVQYDPIDF 511
           +F  +QAAC    +TN+++   + C++++C        F  E      +P ++  D  DF
Sbjct: 729 HFKYIQAAC----KTNQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDF 784

Query: 512 I 514
           +
Sbjct: 785 V 785


>AY119615-1|AAM50269.1| 1678|Drosophila melanogaster LD43101p
           protein.
          Length = 1678

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +2

Query: 344 YFYTMQAACENCTRTNRLRSTSKNCKQTSC----DFNQFYAE*SRRSDIPTLVQYDPIDF 511
           +F  +QAAC    +TN+++   + C++++C        F  E      +P ++  D  DF
Sbjct: 729 HFKYIQAAC----KTNQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDF 784

Query: 512 I 514
           +
Sbjct: 785 V 785


>AE014298-2242|AAS65353.1| 1678|Drosophila melanogaster CG9012-PD,
           isoform D protein.
          Length = 1678

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +2

Query: 344 YFYTMQAACENCTRTNRLRSTSKNCKQTSC----DFNQFYAE*SRRSDIPTLVQYDPIDF 511
           +F  +QAAC    +TN+++   + C++++C        F  E      +P ++  D  DF
Sbjct: 729 HFKYIQAAC----KTNQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDF 784

Query: 512 I 514
           +
Sbjct: 785 V 785


>AE014298-2241|AAS65352.1| 1678|Drosophila melanogaster CG9012-PC,
           isoform C protein.
          Length = 1678

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +2

Query: 344 YFYTMQAACENCTRTNRLRSTSKNCKQTSC----DFNQFYAE*SRRSDIPTLVQYDPIDF 511
           +F  +QAAC    +TN+++   + C++++C        F  E      +P ++  D  DF
Sbjct: 729 HFKYIQAAC----KTNQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDF 784

Query: 512 I 514
           +
Sbjct: 785 V 785


>AE014298-2240|AAN09367.1| 1678|Drosophila melanogaster CG9012-PB,
           isoform B protein.
          Length = 1678

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +2

Query: 344 YFYTMQAACENCTRTNRLRSTSKNCKQTSC----DFNQFYAE*SRRSDIPTLVQYDPIDF 511
           +F  +QAAC    +TN+++   + C++++C        F  E      +P ++  D  DF
Sbjct: 729 HFKYIQAAC----KTNQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDF 784

Query: 512 I 514
           +
Sbjct: 785 V 785


>AE014298-2239|AAF48522.1| 1678|Drosophila melanogaster CG9012-PA,
           isoform A protein.
          Length = 1678

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +2

Query: 344 YFYTMQAACENCTRTNRLRSTSKNCKQTSC----DFNQFYAE*SRRSDIPTLVQYDPIDF 511
           +F  +QAAC    +TN+++   + C++++C        F  E      +P ++  D  DF
Sbjct: 729 HFKYIQAAC----KTNQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDF 784

Query: 512 I 514
           +
Sbjct: 785 V 785


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,588,430
Number of Sequences: 53049
Number of extensions: 686676
Number of successful extensions: 1867
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1865
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)