Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3m07
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   3.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   3.6  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   6.3  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   6.3  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   6.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.3  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   8.3  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   8.3  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   8.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   8.3  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 391 CYNTIFLLFVTQRYQRI 341
           C+++  LL +  RYQR+
Sbjct: 148 CFHSTLLLMILSRYQRL 164


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 765 ISVSGLRCFTEIPI 724
           ++VSGLRC   IP+
Sbjct: 132 LTVSGLRCVNGIPV 145


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 765 ISVSGLRCFTEIPI 724
           ++VSGLRC   IP+
Sbjct: 132 LTVSGLRCVNGIPV 145


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 596 KSFSFPSLNSLRVIWPLTCLFRA 528
           K+  FP L++L +I  L CL  A
Sbjct: 118 KNLQFPLLSTLIIIISLGCLILA 140


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 596 KSFSFPSLNSLRVIWPLTCLFRA 528
           K+  FP L++L +I  L CL  A
Sbjct: 118 KNLQFPLLSTLIIIISLGCLILA 140


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 596 KSFSFPSLNSLRVIWPLTCLFRA 528
           K+  FP L++L +I  L CL  A
Sbjct: 118 KNLQFPLLSTLIIIISLGCLILA 140


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 340 KCADIVE*RTKEKWCYSSVYWKSWCSIKLSLH 435
           KC ++ E   ++K  Y   Y +   +IKL +H
Sbjct: 408 KCLELFEELAEDKDGYKKFYEQFSKNIKLGIH 439


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 140 EFDENCDPNNPRKIKYDDIL 199
           E +   DP    K KYD++L
Sbjct: 100 ELESKFDPQGEYKKKYDELL 119


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 140 EFDENCDPNNPRKIKYDDIL 199
           E +   DP    K KYD++L
Sbjct: 100 ELESKFDPQGEYKKKYDELL 119


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = +3

Query: 252 LTCQRDWEWIFISNRNFYSILEVSK 326
           +T  ++W ++ +S RN+ S + + K
Sbjct: 140 VTIMKEWSFMEMSMRNYGSSINMKK 164


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 382 CYSSVYWKSWCSI 420
           CYS++   SWC +
Sbjct: 319 CYSTIGTVSWCEL 331


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,513
Number of Sequences: 336
Number of extensions: 4226
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)