Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3m07
(775 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052059-1|AAK93483.1| 469|Drosophila melanogaster LP08712p pro... 188 6e-48
AE014297-916|AAF54364.1| 469|Drosophila melanogaster CG8129-PB,... 188 6e-48
AE014297-917|AAF54365.1| 316|Drosophila melanogaster CG8129-PA,... 69 9e-12
AY058508-1|AAL13737.1| 522|Drosophila melanogaster LD21426p pro... 46 8e-05
AE014298-3078|AAF50863.1| 522|Drosophila melanogaster CG1753-PB... 46 8e-05
AE014298-3077|AAF50862.1| 522|Drosophila melanogaster CG1753-PA... 46 8e-05
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 31 2.3
AY089299-1|AAL90037.1| 402|Drosophila melanogaster AT09807p pro... 29 9.4
AE014297-3270|AAF56095.2| 402|Drosophila melanogaster CG17110-P... 29 9.4
>AY052059-1|AAK93483.1| 469|Drosophila melanogaster LP08712p
protein.
Length = 469
Score = 188 bits (459), Expect = 6e-48
Identities = 90/210 (42%), Positives = 126/210 (60%)
Frame = +2
Query: 146 DENCDPNNPRKIKYDDILAASRRIVGAVVRTPCTRAHMSERLGMDIYFKQEFLQYTGSFK 325
D C+P P++I + D+ +A+ I G V RTPC ++ S+ GM++Y K++FLQYTGSFK
Sbjct: 48 DPFCNPEKPQRISFHDVTSAAFLIRGGVERTPCPKSTSSDLYGMELYLKKDFLQYTGSFK 107
Query: 326 ERGVRNALISLSDEQKKNGVIAASTGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCE 505
ERG R AL+SL++EQK+ GVI+AS GNH AL YH +L IP VV+P + K+ KC
Sbjct: 108 ERGARYALLSLTEEQKRTGVISASLGNHAQALCYHGWKLNIPVTVVMPKAAPIMKIQKCR 167
Query: 506 QLGAKVFKHGIDMSAAKLHAMSLGKEKKMIYINGYDHPDVLAXXXXXXXXXXXXLPNVDA 685
A+V G DM AK AM + +E+ ++Y+NGYDHP ++A +P DA
Sbjct: 168 NYKARVIVDGNDMGEAKSLAMRMSREEGLLYVNGYDHPHIMAGQGTIGLEILEQVPEPDA 227
Query: 686 VLIPXXXXXXXXXXXXXXKHLKPDTEIYGV 775
V++P K L P T+I GV
Sbjct: 228 VVVPVGGGGLIAGIATAVKALSPKTKIIGV 257
>AE014297-916|AAF54364.1| 469|Drosophila melanogaster CG8129-PB,
isoform B protein.
Length = 469
Score = 188 bits (459), Expect = 6e-48
Identities = 90/210 (42%), Positives = 126/210 (60%)
Frame = +2
Query: 146 DENCDPNNPRKIKYDDILAASRRIVGAVVRTPCTRAHMSERLGMDIYFKQEFLQYTGSFK 325
D C+P P++I + D+ +A+ I G V RTPC ++ S+ GM++Y K++FLQYTGSFK
Sbjct: 48 DPFCNPEKPQRISFHDVTSAAFLIRGGVERTPCPKSTSSDLYGMELYLKKDFLQYTGSFK 107
Query: 326 ERGVRNALISLSDEQKKNGVIAASTGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCE 505
ERG R AL+SL++EQK+ GVI+AS GNH AL YH +L IP VV+P + K+ KC
Sbjct: 108 ERGARYALLSLTEEQKRTGVISASLGNHAQALCYHGWKLNIPVTVVMPKAAPIMKIQKCR 167
Query: 506 QLGAKVFKHGIDMSAAKLHAMSLGKEKKMIYINGYDHPDVLAXXXXXXXXXXXXLPNVDA 685
A+V G DM AK AM + +E+ ++Y+NGYDHP ++A +P DA
Sbjct: 168 NYKARVIVDGNDMGEAKSLAMRMSREEGLLYVNGYDHPHIMAGQGTIGLEILEQVPEPDA 227
Query: 686 VLIPXXXXXXXXXXXXXXKHLKPDTEIYGV 775
V++P K L P T+I GV
Sbjct: 228 VVVPVGGGGLIAGIATAVKALSPKTKIIGV 257
>AE014297-917|AAF54365.1| 316|Drosophila melanogaster CG8129-PA,
isoform A protein.
Length = 316
Score = 68.5 bits (160), Expect = 9e-12
Identities = 34/104 (32%), Positives = 50/104 (48%)
Frame = +2
Query: 464 VPIHTALNKVNKCEQLGAKVFKHGIDMSAAKLHAMSLGKEKKMIYINGYDHPDVLAXXXX 643
+P + K+ KC A+V G DM AK AM + +E+ ++Y+NGYDHP ++A
Sbjct: 1 MPKAAPIMKIQKCRNYKARVIVDGNDMGEAKSLAMRMSREEGLLYVNGYDHPHIMAGQGT 60
Query: 644 XXXXXXXXLPNVDAVLIPXXXXXXXXXXXXXXKHLKPDTEIYGV 775
+P DAV++P K L P T+I GV
Sbjct: 61 IGLEILEQVPEPDAVVVPVGGGGLIAGIATAVKALSPKTKIIGV 104
>AY058508-1|AAL13737.1| 522|Drosophila melanogaster LD21426p
protein.
Length = 522
Score = 45.6 bits (103), Expect = 8e-05
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Frame = +2
Query: 215 IVGAVVRTPCTRAHMSERLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQK--KNG-- 382
++G S+ + ++Y K EFL GS K+R + ++ ++EQ K G
Sbjct: 52 VIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDR-IGYRMVQDAEEQGLLKPGYT 110
Query: 383 VIAASTGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 529
+I ++GN G L+ G CI+V+P + KV+ LGAK+ +
Sbjct: 111 IIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIR 159
>AE014298-3078|AAF50863.1| 522|Drosophila melanogaster CG1753-PB,
isoform B protein.
Length = 522
Score = 45.6 bits (103), Expect = 8e-05
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Frame = +2
Query: 215 IVGAVVRTPCTRAHMSERLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQK--KNG-- 382
++G S+ + ++Y K EFL GS K+R + ++ ++EQ K G
Sbjct: 52 VIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDR-IGYRMVQDAEEQGLLKPGYT 110
Query: 383 VIAASTGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 529
+I ++GN G L+ G CI+V+P + KV+ LGAK+ +
Sbjct: 111 IIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIR 159
>AE014298-3077|AAF50862.1| 522|Drosophila melanogaster CG1753-PA,
isoform A protein.
Length = 522
Score = 45.6 bits (103), Expect = 8e-05
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Frame = +2
Query: 215 IVGAVVRTPCTRAHMSERLGMDIYFKQEFLQYTGSFKERGVRNALISLSDEQK--KNG-- 382
++G S+ + ++Y K EFL GS K+R + ++ ++EQ K G
Sbjct: 52 VIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSVKDR-IGYRMVQDAEEQGLLKPGYT 110
Query: 383 VIAASTGNHGAALSYHSTQLGIPCIVVVPIHTALNKVNKCEQLGAKVFK 529
+I ++GN G L+ G CI+V+P + KV+ LGAK+ +
Sbjct: 111 IIEPTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIR 159
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 30.7 bits (66), Expect = 2.3
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 576 PKLIACNLAADMSIPCLKTFAPSCS 502
P ++CNLA + +PC + F +C+
Sbjct: 221 PACVSCNLAPHLPVPCTRIFCANCT 245
>AY089299-1|AAL90037.1| 402|Drosophila melanogaster AT09807p
protein.
Length = 402
Score = 28.7 bits (61), Expect = 9.4
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 380 GVIAASTGNHGAALSYHSTQLGIPCIVVVPI-HTALNKVNKCEQLGAKVFKHGIDM 544
G+I + GA S++ Q+GIP + PI +T + N E L A + HGI +
Sbjct: 336 GLITHTRVFPGATDSFYVRQVGIPALGFSPINNTPVLLHNHDEYLRADTYLHGIQV 391
>AE014297-3270|AAF56095.2| 402|Drosophila melanogaster CG17110-PA
protein.
Length = 402
Score = 28.7 bits (61), Expect = 9.4
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 380 GVIAASTGNHGAALSYHSTQLGIPCIVVVPI-HTALNKVNKCEQLGAKVFKHGIDM 544
G+I + GA S++ Q+GIP + PI +T + N E L A + HGI +
Sbjct: 336 GLITHTRVFPGATDSFYVRQVGIPALGFSPINNTPVLLHNHDEYLRADTYLHGIQV 391
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,826,162
Number of Sequences: 53049
Number of extensions: 703877
Number of successful extensions: 1717
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1714
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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