Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3m05
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    26   0.33 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.8  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   2.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.1  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.4  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +2

Query: 482 KKLYYK*LPSKIYKVFEIEKY 544
           +K ++K L SKIYKV E EKY
Sbjct: 205 RKPFFKLLTSKIYKVLE-EKY 224


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3

Query: 282  HNETKCTTSNNYEKTTPTSTGIKSSLDEG 368
            H +TK TTS     TT  S  I    D G
Sbjct: 1182 HWQTKTTTSTTTRPTTTVSQLIDDKCDSG 1210


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -1

Query: 463 IHR*GLLMTVFFRGFDDVFANLLKGERIRLSPPSSKEL-LIPVEV 332
           + R GLL  V  RG      N L+GE + ++    +E  LIP  V
Sbjct: 195 VERAGLLGGVKMRGLQPDDNNRLRGETLEVAIKEDREAGLIPFYV 239


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -2

Query: 114  FGTMHWNHFNFILFYCFCYVSSSLIVIFF 28
            + + +WN     +F   C   SS I +FF
Sbjct: 917  WSSFYWNLLPIAVFILVCATCSSDIQLFF 945


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -2

Query: 114  FGTMHWNHFNFILFYCFCYVSSSLIVIFF 28
            + + +WN     +F   C   SS I +FF
Sbjct: 917  WSSFYWNLLPIAVFILVCATCSSDIQLFF 945


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 81  ILFYCFCYVSSSLIVIFF 28
           I+F CF  V  +L  +FF
Sbjct: 221 IVFVCFSLVEDTLPCVFF 238


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = +1

Query: 586 MAHAILSENYYCKEAGSK 639
           ++  +  +N YCK  G K
Sbjct: 638 LSRDVYQDNVYCKNGGGK 655


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,092
Number of Sequences: 336
Number of extensions: 3145
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)