Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3m05
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1 ...    25   2.2  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    23   6.8  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   6.8  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   9.0  

>AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1
           protein.
          Length = 45

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 276 CCHNETKCTTSNNYEKTTPTSTGIKSSLDEGGLK 377
           CC N+ KCT+        P +T  K +   GG K
Sbjct: 5   CCGNDCKCTSGCG--SGQPCATDCKCACASGGCK 36


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 503 LPSKIYKVFEIEKYCIKRYSESQNIFYLW 589
           +PSK+  V+ +      R++E  +I Y W
Sbjct: 440 VPSKVNDVYFLRMAVCSRFTEPADIDYSW 468


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 503 LPSKIYKVFEIEKYCIKRYSESQNIFYLW 589
           +PSK+  V+ +      R++E  +I Y W
Sbjct: 471 VPSKVNDVYFLRMAVCSRFTEPADIDYSW 499


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 664 KFI*SGLIFSTQPLCNNNFLIVLHG 590
           +F  +G  F T+     NFL  LHG
Sbjct: 286 RFQHAGTRFKTKQFSKENFLATLHG 310


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,723
Number of Sequences: 2352
Number of extensions: 11349
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)