Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3m05
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74043-8|CAA98538.1| 368|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 30 1.3
AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical ... 29 3.1
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF047661-6|AAC04438.2| 577|Caenorhabditis elegans Hypothetical ... 28 7.1
Z82264-4|CAB05162.1| 491|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical pr... 27 9.4
CU457740-5|CAM36335.1| 361|Caenorhabditis elegans Hypothetical ... 27 9.4
>Z74043-8|CAA98538.1| 368|Caenorhabditis elegans Hypothetical
protein T19B10.6 protein.
Length = 368
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 309 NNYEKTTPTSTGIKSSLDEGGLKRILSPFNKFANTSSNPRKNTVIN 446
N+Y K T S G + GG+ R+L P N F + SS P VI+
Sbjct: 273 NSYPKATQNSGGNRLGGTSGGVSRLLPPVN-FTSPSSAPVAEQVID 317
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein
C03D6.4 protein.
Length = 1390
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = +3
Query: 285 NETKCTTSNNYEKTTPTSTGIKSSLDEGGLKRILSPFNKFANTSSNPRKNT 437
N T + TPT SS+ GG K SPF F P K +
Sbjct: 1086 NSTNIFGARTTTTATPTPASNTSSIFGGGSKAASSPFGSFGQAGCQPAKTS 1136
>AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical
protein Y67D2.2 protein.
Length = 474
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +3
Query: 369 GLKRILSPFNKFANTSSNPRKNTVINSPYRCIGLSSKEKSYIISNCQARSTRYSKLKNIA 548
G I+ F +S R + + SP C+GL++ E +NC R+ +Y +
Sbjct: 180 GSPSIIRKLMSFQRCASMARIDASLRSP--CVGLTATEYRCCNTNCGYRTVKYESFTVLT 237
Query: 549 LNAIQNRKI 575
L AI N ++
Sbjct: 238 L-AIPNSQM 245
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/74 (25%), Positives = 30/74 (40%)
Frame = +3
Query: 300 TTSNNYEKTTPTSTGIKSSLDEGGLKRILSPFNKFANTSSNPRKNTVINSPYRCIGLSSK 479
T S T P+STG SS G + +S + A+T+S+ + S S
Sbjct: 1755 TASPAASSTAPSSTGTMSSTSSGTVGSTMSQSSTAASTTSHTGSTVTLGSSSTSSNQMST 1814
Query: 480 EKSYIISNCQARST 521
+ + + A ST
Sbjct: 1815 SQGSSVGSTVASST 1828
>AF047661-6|AAC04438.2| 577|Caenorhabditis elegans Hypothetical
protein M70.5 protein.
Length = 577
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 438 VINSPYRCIGLSSKEKSYIISNCQARSTRYSKLKNIALNAIQNRKIFSIY 587
+ N PY C G K +S I+ + +K ++I + IQN ++Y
Sbjct: 261 ITNQPYFCEGDGFKGESKIVKIYAGCDKKIAKFEDIKDSKIQNPSAITVY 310
>Z82264-4|CAB05162.1| 491|Caenorhabditis elegans Hypothetical
protein C49C3.9 protein.
Length = 491
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +3
Query: 417 SNPRKNTVINSPYRCIGLSSKEKSYIISNCQARSTRYSKLKNIALNAIQNRKIFSIYGPC 596
+NP NTV + YR I + I + C K+ I+ + N + IYG C
Sbjct: 280 ANPLLNTV-GTTYRNISFRGDGEVTIYAGCVTGEEEDKKIATISPSNSVNYEDILIYGTC 338
Query: 597 NT 602
T
Sbjct: 339 KT 340
>Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical
protein F37D6.2c protein.
Length = 584
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 291 TKCTTSNNYEKTTPTSTGIKSSLDEGGLKRILSPFNK 401
T NN + T STG + D+ G++R+ +NK
Sbjct: 29 TTANHGNNSQATVHVSTGKNLNFDQIGIRRLSDVYNK 65
>Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical
protein F37D6.2b protein.
Length = 581
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 291 TKCTTSNNYEKTTPTSTGIKSSLDEGGLKRILSPFNK 401
T NN + T STG + D+ G++R+ +NK
Sbjct: 28 TTANHGNNSQATVHVSTGKNLNFDQIGIRRLSDVYNK 64
>Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical
protein F37D6.2a protein.
Length = 582
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 291 TKCTTSNNYEKTTPTSTGIKSSLDEGGLKRILSPFNK 401
T NN + T STG + D+ G++R+ +NK
Sbjct: 29 TTANHGNNSQATVHVSTGKNLNFDQIGIRRLSDVYNK 65
>CU457740-5|CAM36335.1| 361|Caenorhabditis elegans Hypothetical
protein C50E10.5 protein.
Length = 361
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
Frame = -2
Query: 105 MHW----NHFNFILFYCFCYVSSSLIVIFF 28
MHW NH NF L + C++ L V+ F
Sbjct: 183 MHWFCFFNHINFFLGFIVCFLFIILAVVIF 212
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,284,088
Number of Sequences: 27780
Number of extensions: 276062
Number of successful extensions: 721
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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