SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3m02
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    25   0.78 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    24   1.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   1.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.4  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    22   5.5  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   7.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   7.3  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.6  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 332 TQHLETKVREDVLHSLHNGFLQTLNNAWTDH 424
           T+ + T+  +D+    +  F ++L N W DH
Sbjct: 282 TKPIWTRNADDISQEEYGEFYKSLTNDWEDH 312


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +2

Query: 392 LQTLNN--AWTDHQTSMVMIRDILMYMDRVFVQQNE 493
           ++T N+   WT  QT    +  +LMY D +F+ ++E
Sbjct: 204 VETFNDIFGWTILQTVFFTVPRVLMYFD-IFITEHE 238


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +1

Query: 355 PRRC-IAFITQWFLTNSQQCMD*PSN 429
           P  C   F+ +W+ T S+ C D P N
Sbjct: 54  PMTCRYTFLLEWYHTLSKACYDCPYN 79


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -3

Query: 577 LTKMISNASITNNLISEDNEPKIVDIVNFILLNKNSVHIHQNI 449
           L  +I   +I  NL   + +  IV+ + +ILL  NS   HQ I
Sbjct: 419 LVVIIGTLAIIANL---NGDTMIVEAMAYILLAMNSAVCHQTI 458


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -3

Query: 577 LTKMISNASITNNLISEDNEPKIVDIVNFILLNKNSVHIHQNI 449
           L  +I   +I  NL   + +  IV+ + +ILL  NS   HQ I
Sbjct: 144 LVVIIGTLAIIANL---NGDTMIVEAMAYILLAMNSAVCHQTI 183


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +2

Query: 335 QHLETKVREDVLHSLHNGFLQTLNN 409
           Q ++TKVRE++L  +    + T N+
Sbjct: 16  QDIQTKVREEILSVVGKEKIPTYND 40


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 340 MLSDYFLEASV*SFSMFVQYHCICI 266
           ML+ Y+L+A +  +  F  YH + +
Sbjct: 193 MLAQYYLQADMLLWHTFGYYHILAM 217


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 340 MLSDYFLEASV*SFSMFVQYHCICI 266
           ML+ Y+L+A +  +  F  YH + +
Sbjct: 193 MLAQYYLQADMLLWHTFGYYHILAM 217


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 424 SNQHGHDKRYFDVYGQSFCST 486
           +N HGH+    + Y Q++  T
Sbjct: 288 ANGHGHNTSSHNYYAQNYAPT 308


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +3

Query: 225 RKTTLDYHLKSFTVMHIQWYCTNMEKDYTL 314
           + T L      F  +   W CT ++KD  L
Sbjct: 75  KNTYLIILFADFAYLETTWICTLLKKDKLL 104


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +3

Query: 225 RKTTLDYHLKSFTVMHIQWYCTNMEKDYTL 314
           + T L      F  +   W CT ++KD  L
Sbjct: 93  KNTYLIILFADFAYLETTWICTLLKKDKLL 122


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 172 LLIHSHPSVWIHLV 131
           +L+ S   VW+HLV
Sbjct: 264 VLVQSEKIVWLHLV 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,968
Number of Sequences: 336
Number of extensions: 4173
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -