Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3l24
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   1.6  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       25   1.6  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   6.6  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 515 FIWS*T*SRMQKHLVKLGSPRGTHFAWKHEG 607
           F+W     R    L+   +   THF+W H+G
Sbjct: 89  FVWIKYEGRWSVELINDRNTPVTHFSWSHDG 119


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 663  SAVLNTGHKDLFHPFPKNYPSCFQAK 586
            S VL  G      P P N+P+C+  K
Sbjct: 949  SLVLKVGDSSEMLPAPANFPTCYDFK 974


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 291 RVVNTQKCIRAGGKH 335
           R V  Q C+R GG+H
Sbjct: 863 RYVTEQDCLRVGGQH 877


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,699
Number of Sequences: 2352
Number of extensions: 17036
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)