Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3l24
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97013-4|AAB52339.1| 968|Caenorhabditis elegans Alanyl trna syn... 313 9e-86
U41660-1|AAA84420.1| 272|Caenorhabditis elegans AlaRS A protein. 313 9e-86
Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical p... 233 6e-62
AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA s... 233 6e-62
U00043-12|AAC77504.2| 613|Caenorhabditis elegans Hypothetical p... 30 1.3
AF003146-6|ABS83849.1| 233|Caenorhabditis elegans Skn-1 depende... 29 3.9
Z82284-7|CAE11307.1| 343|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical p... 27 9.1
Z77665-1|CAB01220.1| 339|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p... 27 9.1
>U97013-4|AAB52339.1| 968|Caenorhabditis elegans Alanyl trna
synthetase protein 2 protein.
Length = 968
Score = 313 bits (768), Expect = 9e-86
Identities = 136/190 (71%), Positives = 158/190 (83%), Gaps = 1/190 (0%)
Frame = +3
Query: 102 MTGNEIRKTFIDFFI-KKGHKYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGSVDPNSDM 278
+T +E+R TFI+FF KK H YVHSSS IP DDPTLLFANAGMNQFKP+FLG DPNSD+
Sbjct: 4 LTASEVRSTFINFFREKKEHTYVHSSSVIPHDDPTLLFANAGMNQFKPLFLGIADPNSDL 63
Query: 279 AQYIRVVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICAWAWELLT 458
A+ R VNTQKCIRAGGKHNDLDDVGKDVYHHT+FEM+GNWSFGDYFKKEI WAWELLT
Sbjct: 64 AKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWSFGDYFKKEIITWAWELLT 123
Query: 459 DVFKLSRERLYVTYFGGDPSSGLEPDLECKNIWLNLGVPEAHILPGSMKDNFWEMGETGP 638
V+ + ERLYV+ FGGD ++G+ D E ++IW ++GVP+ IL MKDNFWEMG+ GP
Sbjct: 124 TVYGIPAERLYVSVFGGDEANGVPADSEARDIWRSVGVPDERILNFGMKDNFWEMGDVGP 183
Query: 639 CGPCSELHYD 668
CGPCSE+HYD
Sbjct: 184 CGPCSEIHYD 193
>U41660-1|AAA84420.1| 272|Caenorhabditis elegans AlaRS A protein.
Length = 272
Score = 313 bits (768), Expect = 9e-86
Identities = 136/190 (71%), Positives = 158/190 (83%), Gaps = 1/190 (0%)
Frame = +3
Query: 102 MTGNEIRKTFIDFFI-KKGHKYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGSVDPNSDM 278
+T +E+R TFI+FF KK H YVHSSS IP DDPTLLFANAGMNQFKP+FLG DPNSD+
Sbjct: 4 LTASEVRSTFINFFREKKEHTYVHSSSVIPHDDPTLLFANAGMNQFKPLFLGIADPNSDL 63
Query: 279 AQYIRVVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICAWAWELLT 458
A+ R VNTQKCIRAGGKHNDLDDVGKDVYHHT+FEM+GNWSFGDYFKKEI WAWELLT
Sbjct: 64 AKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWSFGDYFKKEIITWAWELLT 123
Query: 459 DVFKLSRERLYVTYFGGDPSSGLEPDLECKNIWLNLGVPEAHILPGSMKDNFWEMGETGP 638
V+ + ERLYV+ FGGD ++G+ D E ++IW ++GVP+ IL MKDNFWEMG+ GP
Sbjct: 124 TVYGIPAERLYVSVFGGDEANGVPADSEARDIWRSVGVPDERILNFGMKDNFWEMGDVGP 183
Query: 639 CGPCSELHYD 668
CGPCSE+HYD
Sbjct: 184 CGPCSEIHYD 193
>Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical
protein W02B12.6a protein.
Length = 793
Score = 233 bits (571), Expect = 6e-62
Identities = 109/199 (54%), Positives = 137/199 (68%), Gaps = 2/199 (1%)
Frame = +3
Query: 78 KKLKMDTSMTGNEIRKTFIDFFIKKGHKYVHSSSTIPLD-DPTLLFANAGMNQFKPIFLG 254
K + + + +E+RK+F +FF K H+ + SSS IP + D TLLF NAGMNQFKP+ L
Sbjct: 14 KSISLGFYHSHSELRKSFYEFFKSKNHEILRSSSVIPDENDGTLLFTNAGMNQFKPLILS 73
Query: 255 SVDPNSDMAQYIRVVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYF-KKEI 431
S + RV N QKCIRAGGKHNDLDDVGKD++H TFFEMMGNWSF D F K+E
Sbjct: 74 STESR-------RVANIQKCIRAGGKHNDLDDVGKDLHHQTFFEMMGNWSFNDAFSKEEA 126
Query: 432 CAWAWELLTDVFKLSRERLYVTYFGGDPSSGLEPDLECKNIWLNLGVPEAHILPGSMKDN 611
C +AWE L ++ ++ +RLYV+YFGG GL D EC+ IW +GV ILP + +N
Sbjct: 127 CRYAWEYLVEILGINADRLYVSYFGGIEKLGLPEDRECREIWKRIGVSSNRILP-FVAEN 185
Query: 612 FWEMGETGPCGPCSELHYD 668
FWEMG GPCGPC+E+HYD
Sbjct: 186 FWEMGAAGPCGPCTEIHYD 204
>AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA
synthetase protein.
Length = 793
Score = 233 bits (571), Expect = 6e-62
Identities = 109/199 (54%), Positives = 137/199 (68%), Gaps = 2/199 (1%)
Frame = +3
Query: 78 KKLKMDTSMTGNEIRKTFIDFFIKKGHKYVHSSSTIPLD-DPTLLFANAGMNQFKPIFLG 254
K + + + +E+RK+F +FF K H+ + SSS IP + D TLLF NAGMNQFKP+ L
Sbjct: 14 KSISLGFYHSHSELRKSFYEFFKSKNHEILRSSSVIPDENDGTLLFTNAGMNQFKPLILS 73
Query: 255 SVDPNSDMAQYIRVVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYF-KKEI 431
S + RV N QKCIRAGGKHNDLDDVGKD++H TFFEMMGNWSF D F K+E
Sbjct: 74 STESR-------RVANIQKCIRAGGKHNDLDDVGKDLHHQTFFEMMGNWSFNDAFSKEEA 126
Query: 432 CAWAWELLTDVFKLSRERLYVTYFGGDPSSGLEPDLECKNIWLNLGVPEAHILPGSMKDN 611
C +AWE L ++ ++ +RLYV+YFGG GL D EC+ IW +GV ILP + +N
Sbjct: 127 CRYAWEYLVEILGINADRLYVSYFGGIEKLGLPEDRECREIWKRIGVSSNRILP-FVAEN 185
Query: 612 FWEMGETGPCGPCSELHYD 668
FWEMG GPCGPC+E+HYD
Sbjct: 186 FWEMGAAGPCGPCTEIHYD 204
>U00043-12|AAC77504.2| 613|Caenorhabditis elegans Hypothetical
protein T26A5.1 protein.
Length = 613
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = -2
Query: 649 HGPQGPVSPISQKLSFMLPGKMCASGTPKFNQMFLHSRSGSRPDEGSPPKYVTYNLSL 476
H P + + ++ ++ G GTP+ + F PDE +P +++ Y L++
Sbjct: 231 HQPSSQLYQMFHRVIYLANGSTAFQGTPQESISFFEKCGHRVPDEYNPSEWIIYKLAV 288
>AF003146-6|ABS83849.1| 233|Caenorhabditis elegans Skn-1 dependent
zygotic transcriptprotein 22 protein.
Length = 233
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 543 CKNIWLNLGVPEAHILPGSMKDNFWEMGE 629
CKN W VP I G++ WE+GE
Sbjct: 114 CKN-WFEFKVPNIFINDGTLAQKKWELGE 141
>Z82284-7|CAE11307.1| 343|Caenorhabditis elegans Hypothetical
protein T27E7.8 protein.
Length = 343
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 419 KVVTK*PVSHHFKKCMMIYIFSYVIQIIVFSTCSNTFLGV-NYSNI 285
KV K ++ + +IY+ S ++QI+ FSTC +L + YSN+
Sbjct: 200 KVFGKFWETYFVQASQLIYLIS-IVQIVFFSTCCVYYLIIFKYSNV 244
>Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical
protein F54B8.16 protein.
Length = 279
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 371 MIYIFSYVIQIIVFSTCSNTFLGVNYSNI 285
+IY+F VI II++S S T + VNY I
Sbjct: 216 LIYLFFNVIPIILYSHFSPTSVKVNYPPI 244
>Z77665-1|CAB01220.1| 339|Caenorhabditis elegans Hypothetical
protein K02E11.2 protein.
Length = 339
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -1
Query: 389 HFKKCMMIYIFSYVIQIIVFSTCSNTFLGVNYSNILSHIRIWI 261
+F + + ++I Y++ I + C TFL NY +IW+
Sbjct: 104 NFARTVCLFIAMYILPIFMVERCLATFLVANYE---KSRKIWV 143
>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
protein F40G12.3 protein.
Length = 1099
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 529 SRPDEGSPPKYVTYNLSLDNLKTSVNSSQAQAH 431
SRP+ G P VTY+ S D+ + S ++ H
Sbjct: 335 SRPNPGKPTPDVTYSSSTDSTTAITSHSTSELH 367
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,980,929
Number of Sequences: 27780
Number of extensions: 401047
Number of successful extensions: 933
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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