Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3l21
(733 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0076 + 14350020-14350164,14351020-14351129,14351436-143516... 31 0.94
05_06_0236 + 26614060-26614543,26614629-26614657,26615820-266158... 29 3.8
01_05_0309 - 20713774-20713818,20713838-20713915,20714044-207142... 29 5.0
03_05_0621 - 26198985-26199020,26199539-26199652,26200260-262006... 28 6.6
11_06_0263 + 21777178-21777342,21777742-21777823,21777939-217780... 28 8.8
10_01_0025 - 328105-328188,328281-328337,328680-328734,328809-32... 28 8.8
03_01_0581 + 4310136-4310186,4310940-4311144,4311245-4311410,431... 28 8.8
03_01_0161 + 1307206-1307769,1307979-1308101,1308182-1308286,130... 28 8.8
02_01_0016 + 110796-110979,111252-111768,111847-112213 28 8.8
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 28 8.8
>09_04_0076 +
14350020-14350164,14351020-14351129,14351436-14351601,
14351740-14351840,14351960-14352032,14352111-14352252,
14353239-14353399,14354017-14354129,14354226-14354325,
14354580-14354676,14354798-14354849,14355074-14355175,
14355256-14355402,14355485-14355656,14355752-14355991,
14356565-14356621,14356853-14356942,14357089-14357284,
14358117-14358228,14358305-14358459,14359155-14360580,
14360663-14360857,14361214-14361684
Length = 1540
Score = 31.1 bits (67), Expect = 0.94
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = +2
Query: 416 IMTLYIDTKLSFSDENVVSTVAA----WHPSLPFLAIGSYNQEKGGFATIFQENGLPLEG 583
I T + L + ++ + V A +HP+L ++ IG ++GG + +
Sbjct: 188 IQTYVVHYTLQLAVDSTIKLVGAGAFGFHPTLEWIFIG----DRGGTLLAWDVSTERPSM 243
Query: 584 CEWPILSSNQVTALAWHPTRRLLVVGWDGGELYIW 688
S +T+++W PT RLLV G L +W
Sbjct: 244 IGITQAGSQPITSVSWLPTLRLLVTISKDGALQVW 278
>05_06_0236 +
26614060-26614543,26614629-26614657,26615820-26615876,
26616250-26616465
Length = 261
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +2
Query: 491 PSLPFLAIGSYNQEKGG----FATIFQENGLPLEGCEWPILSSNQVTALAWHPTRRLLVV 658
P LP +A GS + +G FA NG +G EW + Q+ + L
Sbjct: 21 PLLPTMAGGSRGRRRGRGRRRFAVPPSRNGSSSQGTEWCPVPPEQLPVNEYESLAASLPF 80
Query: 659 GWDGGELYIW 688
W G+L ++
Sbjct: 81 SWAAGDLTVY 90
>01_05_0309 - 20713774-20713818,20713838-20713915,20714044-20714222,
20714296-20714556,20715222-20715393,20715501-20715662,
20716435-20716863,20717729-20717785,20717872-20718842,
20719098-20719182,20719269-20719637,20719756-20720001,
20720090-20720362,20720663-20720827,20721328-20721556,
20721727-20722168,20723152-20724138,20724352-20724517,
20725070-20725728,20725820-20726186
Length = 2113
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 458 ENVVSTVAAWHPSLPFLAIGSYN 526
EN+ S + HPSLP L +GS N
Sbjct: 1786 ENIHSRALSRHPSLPLLLVGSSN 1808
>03_05_0621 -
26198985-26199020,26199539-26199652,26200260-26200623,
26201232-26201527
Length = 269
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 614 VTALAWHPTRRLLVVGWDGGELYIW 688
VT++A+ + RLL G+ G+ Y+W
Sbjct: 190 VTSIAFSISGRLLFAGYSNGDCYVW 214
>11_06_0263 +
21777178-21777342,21777742-21777823,21777939-21778028,
21778447-21778604,21778852-21778873,21779048-21779175,
21779486-21779685,21780600-21780663,21781594-21781704,
21781804-21781941,21782306-21782448,21782521-21782575,
21782921-21782977,21783093-21783176
Length = 498
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 608 NQVTALAWHPTRRLLVVGWDGGELYIW 688
N V +AW P LV G GEL +W
Sbjct: 176 NWVLCIAWSPDGNHLVSGSKSGELILW 202
>10_01_0025 -
328105-328188,328281-328337,328680-328734,328809-328951,
330772-330909,331010-331120,332621-332684,334179-334378,
334678-334805,335468-335593,335828-335917,336035-336116,
336845-336910
Length = 447
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 608 NQVTALAWHPTRRLLVVGWDGGELYIW 688
N V +AW P LV G GEL +W
Sbjct: 125 NWVLCIAWSPDGNHLVSGSKSGELILW 151
>03_01_0581 +
4310136-4310186,4310940-4311144,4311245-4311410,
4312035-4312257,4312891-4312967,4313091-4313278,
4313363-4313457,4313674-4313807,4313914-4314024,
4314304-4314619,4314919-4315040,4315183-4315293,
4315824-4316012,4316105-4316263,4316449-4316530,
4317080-4317190
Length = 779
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 597 MGHSQPSKGKPFSWKI 550
+GH QP +GKP WK+
Sbjct: 565 LGHFQPQEGKPALWKL 580
>03_01_0161 +
1307206-1307769,1307979-1308101,1308182-1308286,
1308688-1308867,1308988-1309050,1309151-1309345,
1309704-1309805,1309885-1309947,1310045-1310113,
1310215-1310270,1310587-1310755
Length = 562
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 608 NQVTALAWHPTRRLLVVGWDGGELYIWLEYSWAPI 712
++V L W R L G + LY+W ++S P+
Sbjct: 323 SEVCGLKWSYDNRQLASGGNDNRLYVWNQHSAHPV 357
>02_01_0016 + 110796-110979,111252-111768,111847-112213
Length = 355
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 527 QEKGGFATIFQENGLPLEGCEWPILSSNQVTALAWHP 637
Q +G T + + L GC W +++ N A+A+ P
Sbjct: 225 QPQGSACTFDKWADVGLHGCNWKVVTPNTTVAMAFGP 261
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 27.9 bits (59), Expect = 8.8
Identities = 22/82 (26%), Positives = 29/82 (35%), Gaps = 1/82 (1%)
Frame = +2
Query: 446 SFSDENVVSTVAAWHP-SLPFLAIGSYNQEKGGFATIFQENGLPLEGCEWPILSSNQVTA 622
SF N T AWHP + GSY+ + + + + N V
Sbjct: 347 SFRGHNKDVTALAWHPFHEEYFVSGSYDGAIFHWLVGHETPQIEINNAH-----DNSVWD 401
Query: 623 LAWHPTRRLLVVGWDGGELYIW 688
LAWHP LL G + W
Sbjct: 402 LAWHPVGYLLCSGGNDHATRFW 423
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,878,831
Number of Sequences: 37544
Number of extensions: 344518
Number of successful extensions: 811
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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