Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3l21
         (733 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81041-2|CAB02787.4| 1403|Caenorhabditis elegans Hypothetical pr...    33   0.16 
AC024818-3|AAF60780.2|  453|Caenorhabditis elegans Hypothetical ...    31   0.84 
Z81537-10|CAB04382.1|  416|Caenorhabditis elegans Hypothetical p...    28   5.9  
Z80215-4|CAB02272.1|  189|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z70783-3|CAA94853.4|  755|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z66563-1|CAA91468.1|  306|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z47358-8|CAA87433.1|  702|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z81041-2|CAB02787.4| 1403|Caenorhabditis elegans Hypothetical
           protein C27A7.4 protein.
          Length = 1403

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +2

Query: 485 WHPSLPFLAIGSYNQEKGGFATIFQENGLPLEGCEWPILSSNQVTALAWHPTRRLLVVGW 664
           W P   ++ + + ++  G     F ++   ++  E        V+ + WHP ++ +VVGW
Sbjct: 8   WAPHCGWICVVTQDETTGEANVAFSDHSGSVQ--EKGPSKPGSVSCVRWHPKKQFVVVGW 65

Query: 665 -DGGELYI 685
            DGG  +I
Sbjct: 66  KDGGVCFI 73


>AC024818-3|AAF60780.2|  453|Caenorhabditis elegans Hypothetical
           protein Y54H5A.1 protein.
          Length = 453

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = +2

Query: 482 AWHPSLPFLAIGSYNQEKGGFATIFQENGLPLEGCEWPILSSNQ--VTALAWHPTRRLLV 655
           AW P+   L + S + +  G   ++     P + C   +  +++  V  ++W+    L+V
Sbjct: 282 AWSPTETGL-LASCSAD--GSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRHENLIV 338

Query: 656 VGWDGGELYIW 688
            G D GEL IW
Sbjct: 339 SGGDDGELKIW 349


>Z81537-10|CAB04382.1|  416|Caenorhabditis elegans Hypothetical
           protein F41D3.11 protein.
          Length = 416

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = +2

Query: 539 GFATIFQENGLPLEGCEWPILSSNQVTALAWHPTRRLLVVGWDGGEL 679
           G AT F +  +  +G  W       +T++ WHP    ++ GW   EL
Sbjct: 269 GVATHFGKVRIMKKGTGWA--RDGWLTSMVWHPELDFMLHGWKTNEL 313


>Z80215-4|CAB02272.1|  189|Caenorhabditis elegans Hypothetical
           protein C36B1.7 protein.
          Length = 189

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 551 IFQENGLPLEGCEWPILSSN 610
           IF+ENGL  E C+W ++ ++
Sbjct: 170 IFEENGLKFEFCKWKVVENH 189


>Z70783-3|CAA94853.4|  755|Caenorhabditis elegans Hypothetical
           protein ZK856.5 protein.
          Length = 755

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
 Frame = +2

Query: 254 PTYRLYLYLF*YKTQNNFG*NFNFSELGKNKSVDGVK*KKFSDQKSVKEIISTLIMTLYI 433
           PT+R+Y      K Q+      N  +L KNKS   V    F D   +   I+   M+  +
Sbjct: 322 PTFRVYETDAYSKIQDISTYFINLDDLNKNKSTPFVFEYSFKDAYGITGDINPTTMSALL 381

Query: 434 DTKLSFSD----ENVVSTVAAWHPSLP 502
           D K+  +D    + +    A W+P +P
Sbjct: 382 D-KMKNNDTLFKKYIDYNTAFWNPQMP 407


>Z66563-1|CAA91468.1|  306|Caenorhabditis elegans Hypothetical
           protein F46C3.2 protein.
          Length = 306

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 262 ICWFNVYIISMLCCVKNILS 203
           + +FNVY++  LCC +N  S
Sbjct: 193 LLYFNVYMVGFLCCCENNFS 212


>Z47358-8|CAA87433.1|  702|Caenorhabditis elegans Hypothetical
           protein ZK1307.6 protein.
          Length = 702

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 611 QVTALAWHPTRRLLVVGWDGGELYIWLEYSWAPIRSTSQ 727
           +V  L W P ++LL  G +  +L +W      PI++ +Q
Sbjct: 524 EVCGLKWSPDKQLLASGGNDNQLLVWNLRRNEPIQTYTQ 562


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,234,428
Number of Sequences: 27780
Number of extensions: 338881
Number of successful extensions: 801
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)