BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3l18
(683 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 24 5.1
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 24 5.1
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.8 bits (49), Expect = 5.1
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +1
Query: 160 FLLK---ILLKEADATDQDEMRRQAYEIH 237
FLLK + K+ DQDE+R +Y H
Sbjct: 1198 FLLKMTSLFTKQRVRLDQDELRTSSYNYH 1226
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 23.8 bits (49), Expect = 5.1
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = -3
Query: 495 SDIHWDIWDKYVLIFSFMIFLVTSFAQINKVYNN*NFRRVESPFQWL 355
+D + +W+K F+ TS +K N+ + VE WL
Sbjct: 908 TDGSFGVWEKSGSSVFLTAFVATSMQTASKYMNDIDAAMVEKALDWL 954
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,443
Number of Sequences: 2352
Number of extensions: 10818
Number of successful extensions: 25
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -