BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3l16
(679 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormo... 25 2.2
AY298745-1|AAQ63187.1| 354|Anopheles gambiae G-protein coupled ... 25 2.2
AY341219-1|AAR13783.1| 200|Anopheles gambiae SRPN10 protein. 23 6.7
AY341218-1|AAR13782.1| 200|Anopheles gambiae SRPN10 protein. 23 6.7
AY341217-1|AAR13781.1| 200|Anopheles gambiae SRPN10 protein. 23 6.7
AY341216-1|AAR13780.1| 200|Anopheles gambiae SRPN10 protein. 23 6.7
AY341215-1|AAR13779.1| 200|Anopheles gambiae SRPN10 protein. 23 6.7
AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450 CY... 23 6.7
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 23 6.7
>DQ396551-1|ABD60146.1| 354|Anopheles gambiae adipokinetic hormone
receptor protein.
Length = 354
Score = 25.0 bits (52), Expect = 2.2
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -2
Query: 336 YGYT*NAVVPHVLCPI*SSTRQSHYYRSSFILYAIKNNKYVCV*TMLAVCPLHRAM 169
+ YT ++C + + R Y SSFIL I ++Y V L V HRA+
Sbjct: 108 WAYTVRWTAGDLMCRVMAFFRTFGLYLSSFILICISVDRYFAVLKPLKVHE-HRAV 162
>AY298745-1|AAQ63187.1| 354|Anopheles gambiae G-protein coupled
receptor protein.
Length = 354
Score = 25.0 bits (52), Expect = 2.2
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -2
Query: 336 YGYT*NAVVPHVLCPI*SSTRQSHYYRSSFILYAIKNNKYVCV*TMLAVCPLHRAM 169
+ YT ++C + + R Y SSFIL I ++Y V L V HRA+
Sbjct: 108 WAYTVRWTAGDLMCRVMAFFRTFGLYLSSFILICISVDRYFAVLKPLKVHE-HRAV 162
>AY341219-1|AAR13783.1| 200|Anopheles gambiae SRPN10 protein.
Length = 200
Score = 23.4 bits (48), Expect = 6.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 508 AIRRYGRQRPKTAILL 555
AIRR+G RP A+LL
Sbjct: 2 AIRRFGTLRPVLAVLL 17
>AY341218-1|AAR13782.1| 200|Anopheles gambiae SRPN10 protein.
Length = 200
Score = 23.4 bits (48), Expect = 6.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 508 AIRRYGRQRPKTAILL 555
AIRR+G RP A+LL
Sbjct: 2 AIRRFGTLRPVLAVLL 17
>AY341217-1|AAR13781.1| 200|Anopheles gambiae SRPN10 protein.
Length = 200
Score = 23.4 bits (48), Expect = 6.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 508 AIRRYGRQRPKTAILL 555
AIRR+G RP A+LL
Sbjct: 2 AIRRFGTLRPVLAVLL 17
>AY341216-1|AAR13780.1| 200|Anopheles gambiae SRPN10 protein.
Length = 200
Score = 23.4 bits (48), Expect = 6.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 508 AIRRYGRQRPKTAILL 555
AIRR+G RP A+LL
Sbjct: 2 AIRRFGTLRPVLAVLL 17
>AY341215-1|AAR13779.1| 200|Anopheles gambiae SRPN10 protein.
Length = 200
Score = 23.4 bits (48), Expect = 6.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 508 AIRRYGRQRPKTAILL 555
AIRR+G RP A+LL
Sbjct: 2 AIRRFGTLRPVLAVLL 17
>AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450
CYP12F3 protein.
Length = 515
Score = 23.4 bits (48), Expect = 6.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 285 IKWGRVHEELQRSTCIRSGVIDEDSAAIVRAKS 383
++W V + QR+T VID + A+ KS
Sbjct: 10 VRWRNVQAQAQRNTATAXHVIDPEWASAKPYKS 42
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 23.4 bits (48), Expect = 6.7
Identities = 8/34 (23%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -2
Query: 534 PLSSVTS-YCKSLLSDVRVEPLLCIVHHSTNWQI 436
P +++T+ + + +++V +EP + + + S NW++
Sbjct: 909 PSATITTRWIRQTMTEVLLEPKVSLENPSVNWRL 942
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,027
Number of Sequences: 2352
Number of extensions: 14553
Number of successful extensions: 33
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -