Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3k24
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72511-1|CAA96655.1| 186|Caenorhabditis elegans Hypothetical pr... 64 6e-11
Z72513-3|CAA96671.2| 127|Caenorhabditis elegans Hypothetical pr... 54 9e-08
Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical pr... 31 0.74
L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calciu... 31 0.74
AF497824-1|AAM18102.1| 644|Caenorhabditis elegans putative Na-H... 30 1.7
Z73973-1|CAA98266.1| 357|Caenorhabditis elegans Hypothetical pr... 29 2.3
U41543-10|AAP40531.1| 374|Caenorhabditis elegans Hypothetical p... 29 3.9
U41543-9|AAB37021.2| 453|Caenorhabditis elegans Hypothetical pr... 29 3.9
L23651-2|ABA54424.1| 124|Caenorhabditis elegans Hypothetical pr... 28 5.2
U53150-8|AAA96128.2| 378|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z72511-1|CAA96655.1| 186|Caenorhabditis elegans Hypothetical
protein F55A11.1 protein.
Length = 186
Score = 64.5 bits (150), Expect = 6e-11
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Frame = +3
Query: 372 HYKPMGTGSFTGDSQLLHDAKHLEE--DSKVLTPAMLASMTPEELEFHYFSIHDFDRNTK 545
H +P G F G+ D H++E D KV P A+MTPE+L+FHYF++HD D+N K
Sbjct: 42 HAQP-GQQQFGGEQA--RDEHHIKEHLDGKV-DPT--ANMTPEQLQFHYFNMHDLDKNGK 95
Query: 546 LDGSEMLKAVYHTLDHESPNP 608
LDG E++KA+ H E+P P
Sbjct: 96 LDGVELIKAITH-FHAENPGP 115
>Z72513-3|CAA96671.2| 127|Caenorhabditis elegans Hypothetical
protein T04F3.4 protein.
Length = 127
Score = 54.0 bits (124), Expect = 9e-08
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +3
Query: 393 GSFTGDSQLLHDAKHLEEDSKVLTPAMLASMTPEELEFHYFSIHDFDRNTKLDGSEMLKA 572
G+ + + +HD +H+++ + + +T E+ FHYFS+HD +++ +DG E+LKA
Sbjct: 20 GAKFAEEKEVHDEEHIKQHLE--NKIEVEKLTEEQQRFHYFSMHDLNKDNFIDGIEILKA 77
Query: 573 VYHTLD-HESPNP 608
+ HT D H+S +P
Sbjct: 78 LTHTHDAHDSGHP 90
>Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical
protein F10G8.5 protein.
Length = 190
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 477 ASMTPEELEFHYFSIHDFDRNTKLDGSEMLK---AVYHTLDHESPNPDDDS 620
+S TPE+ F ++D D N +D EM+K A+Y L E DDS
Sbjct: 95 SSGTPEQKLEWAFRMYDIDGNGTIDEKEMIKIIEAIYEMLGPEVTKSADDS 145
>L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calcium
binding protein protein.
Length = 190
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 477 ASMTPEELEFHYFSIHDFDRNTKLDGSEMLK---AVYHTLDHESPNPDDDS 620
+S TPE+ F ++D D N +D EM+K A+Y L E DDS
Sbjct: 95 SSGTPEQKLEWAFRMYDIDGNGTIDEKEMIKIIEAIYEMLGPEVTKSADDS 145
>AF497824-1|AAM18102.1| 644|Caenorhabditis elegans putative Na-H
exchanger isoform 2 protein.
Length = 644
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 654 MSLNRLPPVLLKNRHLDSDFHGLKCDRQLLTFPSR-PISYF 535
MSL R P VL+ L + G +C+ + +PSR PI+YF
Sbjct: 1 MSLLRRPWVLVVGLLLIMSYVGAECEEEEKEYPSRYPIAYF 41
>Z73973-1|CAA98266.1| 357|Caenorhabditis elegans Hypothetical
protein F25D1.2 protein.
Length = 357
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 413 RVASKGTCPHWFVMMVRTFHRRLPRRMM 330
+VASK C WF+ +R H + +R++
Sbjct: 323 KVASKSRCVMWFLASIRFLHHSMKKRVL 350
>U41543-10|AAP40531.1| 374|Caenorhabditis elegans Hypothetical
protein F46H5.2c protein.
Length = 374
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 375 NDGEDVPPASAPADDV 328
N GED+PPAS+PA +
Sbjct: 36 NHGEDIPPASSPATSI 51
>U41543-9|AAB37021.2| 453|Caenorhabditis elegans Hypothetical
protein F46H5.2a protein.
Length = 453
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 375 NDGEDVPPASAPADDV 328
N GED+PPAS+PA +
Sbjct: 36 NHGEDIPPASSPATSI 51
>L23651-2|ABA54424.1| 124|Caenorhabditis elegans Hypothetical
protein C29E4.14 protein.
Length = 124
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +3
Query: 492 EELEFHYFSIHDFDRNTKLDGSEMLKAVYHTLDHES 599
++ +F+YF + D +++ LDG E+ K + D ++
Sbjct: 53 KDRKFYYFKVGDTNQDNHLDGVELFKMITEHSDEKT 88
>U53150-8|AAA96128.2| 378|Caenorhabditis elegans Hypothetical
protein F20A1.2 protein.
Length = 378
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 31 LDFIFLCIFVFDICTLYDSSQFLICSCNR 117
L F FL IFV D+ +Y+ S++L +R
Sbjct: 67 LCFFFLMIFVVDVNMIYNKSEYLFLLFHR 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,517,543
Number of Sequences: 27780
Number of extensions: 301555
Number of successful extensions: 913
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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