Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3k19
(741 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 34 0.47
AF134708-1|AAF22163.1| 820|Homo sapiens disintegrin and metallo... 34 0.62
AC105914-1|AAY41055.1| 820|Homo sapiens unknown protein. 34 0.62
S75420-1|AAB20835.2| 306|Homo sapiens collagen type VI alpha 1(... 33 1.1
BC052575-1|AAH52575.1| 1028|Homo sapiens collagen, type VI, alph... 33 1.1
AF171929-1|AAF03777.1| 820|Homo sapiens metallaproteinase-disin... 33 1.1
X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein. 32 1.9
BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein. 32 1.9
BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein. 32 1.9
AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein p... 32 1.9
X05562-1|CAA29076.1| 1043|Homo sapiens protein ( Human mRNA for ... 31 5.7
AL357874-4|CAI13445.1| 120|Homo sapiens CD72 molecule protein. 31 5.7
AL161773-3|CAH71366.2| 1712|Homo sapiens collagen type IV alpha ... 31 5.7
AL159153-1|CAH72050.2| 1712|Homo sapiens collagen type IV alpha ... 31 5.7
AL139385-2|CAI17005.2| 1712|Homo sapiens collagen type IV alpha ... 31 5.7
AJ890451-1|CAI67595.1| 1125|Homo sapiens collagen, type XXVIII p... 30 7.6
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 34.3 bits (75), Expect = 0.47
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Frame = +1
Query: 319 EYIEDENV-EFPTCCARLRCVVEVNGERIVQTRGQPGELFPDKPWKGQQNEPNPA----V 483
EY E E+V E PT E+NG +GQ GE +P + P PA +
Sbjct: 277 EYKEAESVTEGPTVTEETIAQTEINGHGAYGEKGQKGEPAVVEPGMLVEGPPGPAGPAGI 336
Query: 484 VGMSGIQ-QTPVGGEPQGQASPG 549
+G G+Q T G+P + PG
Sbjct: 337 MGPPGLQGPTGPPGDPGDRGPPG 359
>AF134708-1|AAF22163.1| 820|Homo sapiens disintegrin and
metalloproteinase domain 29 protein.
Length = 820
Score = 33.9 bits (74), Expect = 0.62
Identities = 29/98 (29%), Positives = 40/98 (40%)
Frame = +1
Query: 442 KPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAANVNPDSGWQRY*QPSV 621
KP K QQ+ P+ IQ+ P PQ Q P + S+ +V P + PS
Sbjct: 702 KPIKKQQDVQTPSAKEEEKIQRRPHELPPQSQ--PWVMPSQSQPHVTPYQSHPQV-MPSQ 758
Query: 622 YRLPRAADAGQPPTKALHSVPAV*QNESGTQLSKSPRQ 735
+ P QP S P V ++S QL+ S Q
Sbjct: 759 SQPPVTPSQSQPRVMPSQSQPPVMPSQSHPQLTPSQSQ 796
>AC105914-1|AAY41055.1| 820|Homo sapiens unknown protein.
Length = 820
Score = 33.9 bits (74), Expect = 0.62
Identities = 29/98 (29%), Positives = 39/98 (39%)
Frame = +1
Query: 442 KPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAANVNPDSGWQRY*QPSV 621
KP K QQ+ P+ IQ+ P PQ Q P + S+ V P + PS
Sbjct: 702 KPIKKQQDVQTPSAKEEEKIQRRPHELPPQSQ--PWVMPSQSQPPVTPSQSHPQV-MPSQ 758
Query: 622 YRLPRAADAGQPPTKALHSVPAV*QNESGTQLSKSPRQ 735
+ P QP S P V ++S QL+ S Q
Sbjct: 759 SQPPVTPSQSQPRVMPSQSQPPVMPSQSHPQLTPSQSQ 796
>S75420-1|AAB20835.2| 306|Homo sapiens collagen type VI alpha 1(VI)
chain protein.
Length = 306
Score = 33.1 bits (72), Expect = 1.1
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 412 RGQPGELFP--DKPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAANVNP 585
RG PG P D G++ E PA G G P G P + +PGI ++G +
Sbjct: 204 RGAPGPAGPPGDPGLMGERGEDGPAGNGTEGFPGFP--GYPGNRGAPGINGTKGYPGLKG 261
Query: 586 DSG 594
D G
Sbjct: 262 DEG 264
>BC052575-1|AAH52575.1| 1028|Homo sapiens collagen, type VI, alpha 1
protein.
Length = 1028
Score = 33.1 bits (72), Expect = 1.1
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 412 RGQPGELFP--DKPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAANVNP 585
RG PG P D G++ E PA G G P G P + +PGI ++G +
Sbjct: 490 RGAPGPAGPPGDPGLMGERGEDGPAGNGTEGFPGFP--GYPGNRGAPGINGTKGYPGLKG 547
Query: 586 DSG 594
D G
Sbjct: 548 DEG 550
>AF171929-1|AAF03777.1| 820|Homo sapiens
metallaproteinase-disintegrin protein.
Length = 820
Score = 33.1 bits (72), Expect = 1.1
Identities = 29/98 (29%), Positives = 38/98 (38%)
Frame = +1
Query: 442 KPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAANVNPDSGWQRY*QPSV 621
KP K QQ+ P+ IQ+ P PQ Q P + S+ V P R PS
Sbjct: 702 KPIKKQQDVQTPSAKEEEKIQRRPHELPPQSQ--PWVMPSQSQPPVTPSQSHPRV-MPSQ 758
Query: 622 YRLPRAADAGQPPTKALHSVPAV*QNESGTQLSKSPRQ 735
+ P P S P V ++S QL+ S Q
Sbjct: 759 SQPPVMPSQSHPQLTPSQSQPPVMPSQSHPQLTPSQSQ 796
>X98507-1|CAA67131.1| 1028|Homo sapiens myosin I beta protein.
Length = 1028
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 115 VLPALSAEDVSYQACVDKYSRKGYQP 192
VL AL +E + Y V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900
>BC068013-1|AAH68013.1| 1028|Homo sapiens myosin IC protein.
Length = 1028
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 115 VLPALSAEDVSYQACVDKYSRKGYQP 192
VL AL +E + Y V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900
>BC044891-1|AAH44891.2| 1028|Homo sapiens MYO1C protein protein.
Length = 1028
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 115 VLPALSAEDVSYQACVDKYSRKGYQP 192
VL AL +E + Y V KY RKGY+P
Sbjct: 875 VLQALGSEPIQYAVPVVKYDRKGYKP 900
>AB210015-1|BAE06097.1| 1097|Homo sapiens MYO1C variant protein
protein.
Length = 1097
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 115 VLPALSAEDVSYQACVDKYSRKGYQP 192
VL AL +E + Y V KY RKGY+P
Sbjct: 944 VLQALGSEPIQYAVPVVKYDRKGYKP 969
>X05562-1|CAA29076.1| 1043|Homo sapiens protein ( Human mRNA for
alpha-2 chain of collagen IV N-terminus. ).
Length = 1043
Score = 30.7 bits (66), Expect = 5.7
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +1
Query: 424 GELFPDKPWKGQQ-NEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAANVNPDSGWQ 600
G F +KG++ +E P + G+S + + G P + PG+ +G+ G
Sbjct: 266 GVTFHPDQYKGEKGSEGEPGIRGISLKGEEGIMGFPGLRGYPGLSGEKGSPGQKGSRGLD 325
Query: 601 RY*QPSVYRLPR--AADAGQPPTKALHSVPAV*QNESG 708
Y P R P+ A D G P A P++ + G
Sbjct: 326 GYQGPDGPRGPKGEAGDPGPPGLPAYSPHPSLAKGARG 363
>AL357874-4|CAI13445.1| 120|Homo sapiens CD72 molecule protein.
Length = 120
Score = 30.7 bits (66), Expect = 5.7
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +1
Query: 499 IQQTPVGGEPQGQASPGIFNSRGAANVNPDSGWQRY*QPSVYR-LP-RAADAGQPPTKAL 672
+Q V G P AS + + + P + W+ P+V R LP A AGQP + L
Sbjct: 42 VQVPAVLGVPSSLASSVLGDKAAVKSEQPTASWRAVTSPAVGRILPCECACAGQPRGQVL 101
Query: 673 HSVPA 687
VPA
Sbjct: 102 APVPA 106
>AL161773-3|CAH71366.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 30.7 bits (66), Expect = 5.7
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +1
Query: 424 GELFPDKPWKGQQ-NEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAANVNPDSGWQ 600
G F +KG++ +E P + G+S + + G P + PG+ +G+ G
Sbjct: 266 GVTFHPDQYKGEKGSEGEPGIRGISLKGEEGIMGFPGLRGYPGLSGEKGSPGQKGSRGLD 325
Query: 601 RY*QPSVYRLPR--AADAGQPPTKALHSVPAV*QNESG 708
Y P R P+ A D G P A P++ + G
Sbjct: 326 GYQGPDGPRGPKGEAGDPGPPGLPAYSPHPSLAKGARG 363
>AL159153-1|CAH72050.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 30.7 bits (66), Expect = 5.7
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +1
Query: 424 GELFPDKPWKGQQ-NEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAANVNPDSGWQ 600
G F +KG++ +E P + G+S + + G P + PG+ +G+ G
Sbjct: 266 GVTFHPDQYKGEKGSEGEPGIRGISLKGEEGIMGFPGLRGYPGLSGEKGSPGQKGSRGLD 325
Query: 601 RY*QPSVYRLPR--AADAGQPPTKALHSVPAV*QNESG 708
Y P R P+ A D G P A P++ + G
Sbjct: 326 GYQGPDGPRGPKGEAGDPGPPGLPAYSPHPSLAKGARG 363
>AL139385-2|CAI17005.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 30.7 bits (66), Expect = 5.7
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +1
Query: 424 GELFPDKPWKGQQ-NEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAANVNPDSGWQ 600
G F +KG++ +E P + G+S + + G P + PG+ +G+ G
Sbjct: 266 GVTFHPDQYKGEKGSEGEPGIRGISLKGEEGIMGFPGLRGYPGLSGEKGSPGQKGSRGLD 325
Query: 601 RY*QPSVYRLPR--AADAGQPPTKALHSVPAV*QNESG 708
Y P R P+ A D G P A P++ + G
Sbjct: 326 GYQGPDGPRGPKGEAGDPGPPGLPAYSPHPSLAKGARG 363
>AJ890451-1|CAI67595.1| 1125|Homo sapiens collagen, type XXVIII
protein.
Length = 1125
Score = 30.3 bits (65), Expect = 7.6
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 415 GQPGELFPDKPW-KGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAANVNP 585
G G+ +P P +G P P +G+ G+ T GEP + PG RG P
Sbjct: 633 GLKGDGYPGVPGPRGLPGPPGP--MGLRGVGDTGAKGEPGVRGPPGPSGPRGVGTQGP 688
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,721,911
Number of Sequences: 237096
Number of extensions: 2911107
Number of successful extensions: 12198
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12198
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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