Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3k19
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen prot... 31 0.86
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 30 1.5
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 4.6
Z47809-1|CAA87779.1| 370|Caenorhabditis elegans Hypothetical pr... 28 6.0
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 6.0
Z99281-19|CAD56260.1| 317|Caenorhabditis elegans Hypothetical p... 28 8.0
U53149-5|AAA96121.2| 427|Caenorhabditis elegans Hypothetical pr... 28 8.0
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 28 8.0
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 28 8.0
AF040657-2|AAB95050.2| 312|Caenorhabditis elegans Hypothetical ... 28 8.0
>AF043700-2|AAB97570.1| 283|Caenorhabditis elegans Collagen protein
49 protein.
Length = 283
Score = 31.1 bits (67), Expect = 0.86
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 412 RGQPGELFPDKPWKGQQNEPNP-AVVGMSGIQQTPVG--GEPQGQASPGIFNSRGA 570
+G PG P +GQ +P A+VG++G + P G GEP Q PG+ GA
Sbjct: 185 QGPPGSAGRAGP-RGQAGQPGTIAIVGLAG-RPGPQGPLGEPGAQGEPGVDGKDGA 238
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 415 GQPGELFPDKPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASP-GIFNSRGAANVNPDS 591
G PGE D P +G +P G SGI P P G A P GI GA N
Sbjct: 220 GMPGEPGKDAPQEGSPVPGDPGPPGDSGIPGPP---GPPGMAGPDGIPGMGGAKGQNGPD 276
Query: 592 G 594
G
Sbjct: 277 G 277
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = -2
Query: 524 SPPTGVCWMPLIPTTAGFGSFCWPFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGN 345
SP T + +++ + P S ++SP + + +P TSTT + + +
Sbjct: 452 SPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPS 511
Query: 344 STFSSSMYSWHSSAFS 297
ST SSS+ S SS S
Sbjct: 512 STASSSVSSTASSTQS 527
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = -2
Query: 524 SPPTGVCWMPLIPTTAGFGSFCWPFHGLSGNSSPGCPLVCTILSPFTSTTQRNRAQHVGN 345
SP T + +++ + P S ++SP + + +P TSTT + + +
Sbjct: 452 SPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPS 511
Query: 344 STFSSSMYSWHSSAFS 297
ST SSS+ S SS S
Sbjct: 512 STASSSVSSTASSTQS 527
>Z47809-1|CAA87779.1| 370|Caenorhabditis elegans Hypothetical
protein F42A8.1 protein.
Length = 370
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +1
Query: 139 DVSYQACVDKYSRKGYQPWQEWSDHYTCHRYRCEIRDGKYFIAAV-GC 279
+ Y ACV R YQ + W+D + YRC DG+ + GC
Sbjct: 103 EFGYSACVGTDGRT-YQKGETWTDAKNTYYYRCR-DDGRVVKTTIEGC 148
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +1
Query: 325 IEDENVEFPTCCARLRCVVEVNGERIVQTRGQPGELFPDKPWKGQ--QNEPNPAVVGMSG 498
IE ENVE T A L+ + N + I+Q + L + KG+ +N +G
Sbjct: 444 IESENVELITRLATLQKIHSENADSILQLESENSRLRREVTEKGELIENLIREKPLGTGF 503
Query: 499 IQQTPVGGEPQGQASP 546
QQ +G P
Sbjct: 504 QQQNNLGSSSSSSVQP 519
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.3 bits (60), Expect = 6.0
Identities = 27/112 (24%), Positives = 39/112 (34%), Gaps = 4/112 (3%)
Frame = +1
Query: 415 GQPGELFPDKPWKGQQNEPN----PAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAANVN 582
G G P+KP NEP+ P G +G G P G ++P + S +
Sbjct: 1340 GPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGSSDPNKPG-PNGPSNPSVPESSTGGGPS 1398
Query: 583 PDSGWQRY*QPSVYRLPRAADAGQPPTKALHSVPAV*QNESGTQLSKSPRQN 738
P PS+ D P+ S P++ +G S P N
Sbjct: 1399 PGPSPNEPSNPSILGPSTGGDPSPGPSPNEPSNPSILGPSTGGDPSPGPSPN 1450
>Z99281-19|CAD56260.1| 317|Caenorhabditis elegans Hypothetical
protein Y57G11C.38 protein.
Length = 317
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 651 TAPDESAPQCTRCLTERIGNTTIKV 725
T PD + C C + +GNTTI++
Sbjct: 126 TLPDRNLVHCEECGSVTVGNTTIQI 150
>U53149-5|AAA96121.2| 427|Caenorhabditis elegans Hypothetical
protein C24B5.1 protein.
Length = 427
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 390 IYFDDATQSRTARGEFDILIFDVFVAFQCVFRYFW 286
IYF D Q R + IF+ F+A C F W
Sbjct: 140 IYFYDIFQDSLLRNSYYSCIFNTFLAHVCDFASVW 174
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +1
Query: 469 PNPAVVGMSGIQQTPVGGEPQGQASPGI-FNSRGAANVNPDSGWQRY*QPSVYRLPRAAD 645
P P G Q P G E Q PG F + GA+ P S Y P+ R P+A+
Sbjct: 1063 PAPGAHGYQNGAQGPPGAEVGAQGPPGAHFGAHGASAPPPTS----YGAPTPQRPPQASY 1118
Query: 646 AGQP 657
P
Sbjct: 1119 GAAP 1122
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +1
Query: 469 PNPAVVGMSGIQQTPVGGEPQGQASPGI-FNSRGAANVNPDSGWQRY*QPSVYRLPRAAD 645
P P G Q P G E Q PG F + GA+ P S Y P+ R P+A+
Sbjct: 1083 PAPGAHGYQNGAQGPPGAEVGAQGPPGAHFGAHGASAPPPTS----YGAPTPQRPPQASY 1138
Query: 646 AGQP 657
P
Sbjct: 1139 GAAP 1142
>AF040657-2|AAB95050.2| 312|Caenorhabditis elegans Hypothetical
protein T20H9.1 protein.
Length = 312
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 399 SLSIYFDDATQSRTARGEFDILIFDVFVAFQCVFRYFWFSTSDS 268
SLS+ FD T+ + D++ D F + F WFST+ +
Sbjct: 219 SLSVEFDFFTEENAIKIRDDLMKRDTFRRCEVWFNSSWFSTAQT 262
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,444,321
Number of Sequences: 27780
Number of extensions: 425360
Number of successful extensions: 1465
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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