Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3k18
         (385 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0006 - 13632902-13633026,13634013-13634179,13634286-136344...    27   5.1  
08_02_0558 + 18668856-18668926,18669064-18669175,18669834-186698...    26   8.9  

>09_04_0006 -
           13632902-13633026,13634013-13634179,13634286-13634437,
           13634564-13634672,13635096-13635280,13635372-13635687,
           13635796-13635903,13635994-13636139,13636223-13636237
          Length = 440

 Score = 27.1 bits (57), Expect = 5.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 235 DAACGCISKSLSIIFVASDR 176
           D ACGCI+ S S IF   D+
Sbjct: 388 DCACGCIALSSSSIFFKDDK 407


>08_02_0558 +
           18668856-18668926,18669064-18669175,18669834-18669887,
           18670121-18670191,18670291-18670372,18670463-18670559,
           18670928-18670998
          Length = 185

 Score = 26.2 bits (55), Expect = 8.9
 Identities = 7/27 (25%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -3

Query: 317 LLVEFFNFLTFLGW-HIDWTSLMPAVQ 240
           L + F+N++ F+GW  + W+ ++  ++
Sbjct: 11  LYLSFYNWIVFIGWVQVSWSMILALLE 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,484,229
Number of Sequences: 37544
Number of extensions: 178587
Number of successful extensions: 361
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 636799876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)