BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3k18
(385 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 25 1.3
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 24 1.7
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 23 3.8
AF487534-1|AAL93295.1| 509|Anopheles gambiae cytochrome P450 CY... 23 5.1
AY745205-1|AAU93472.1| 91|Anopheles gambiae cytochrome P450 pr... 22 8.9
AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450 CY... 22 8.9
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 24.6 bits (51), Expect = 1.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 72 LLLRIPSVPCKLVVC*CYWLVF 137
L+ IPS+ L+VC +WL+F
Sbjct: 1427 LVQAIPSIFNVLLVCLIFWLIF 1448
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 24.2 bits (50), Expect = 1.7
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 7 KLYENNLSDNNQKIRYY 57
KL + ++SDNN+K RY+
Sbjct: 1048 KLIDMSISDNNKKERYW 1064
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
TPR-containing phosphoprotein protein.
Length = 1200
Score = 23.0 bits (47), Expect = 3.8
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 223 GCISKSLSIIFVASD 179
GC+++ +IFVASD
Sbjct: 537 GCMARDKGLIFVASD 551
>AF487534-1|AAL93295.1| 509|Anopheles gambiae cytochrome P450
CYP6P3 protein.
Length = 509
Score = 22.6 bits (46), Expect = 5.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 151 PTFCIFIRHGLMQQK 195
P CI +R GLMQ K
Sbjct: 451 PRICIGLRFGLMQTK 465
>AY745205-1|AAU93472.1| 91|Anopheles gambiae cytochrome P450
protein.
Length = 91
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 151 PTFCIFIRHGLMQQK 195
P CI +R G+MQ K
Sbjct: 74 PRICIGLRFGMMQTK 88
>AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450
CYP6P2 protein.
Length = 507
Score = 21.8 bits (44), Expect = 8.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 151 PTFCIFIRHGLMQQK 195
P CI +R G+MQ K
Sbjct: 449 PRICIGLRFGMMQTK 463
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,967
Number of Sequences: 2352
Number of extensions: 7498
Number of successful extensions: 32
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -