Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3k18
         (385 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100307-7|AAC68934.1|  353|Caenorhabditis elegans Hypothetical ...    26   7.9  
AF025466-5|AAB71031.2|  428|Caenorhabditis elegans Nematode asta...    26   7.9  

>AF100307-7|AAC68934.1|  353|Caenorhabditis elegans Hypothetical
           protein T12B5.10 protein.
          Length = 353

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 332 KKVSALLVEFFNFLTFLGWHIDWTSLMPAVQLR 234
           K  S ++V FF+F  F   HID      A+Q+R
Sbjct: 249 KIASIMIVHFFHFKCFTINHIDEFPAQAAIQMR 281


>AF025466-5|AAB71031.2|  428|Caenorhabditis elegans Nematode astacin
           protease protein27 protein.
          Length = 428

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -2

Query: 219 AYRSLSQLFLLHQTVAYKYTECWY*LVEKQANNTSIQLIYKGQTEF 82
           A+   S+  L HQ  AY+Y    +  V++ A NT+  +IY    +F
Sbjct: 185 AFAKESEKQLDHQEAAYEYGSVMHYSVDQFAVNTNRPVIYARDQKF 230


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,674,918
Number of Sequences: 27780
Number of extensions: 171900
Number of successful extensions: 415
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)