Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3k15
         (547 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-408|AAF51914.1|  730|Drosophila melanogaster CG1077-PA ...    36   0.047
BT022460-1|AAY54876.1|  514|Drosophila melanogaster IP11746p pro...    30   1.8  
AE014134-2795|AAF53578.1|  484|Drosophila melanogaster CG13282-P...    30   1.8  
AY061505-1|AAL29053.1|  766|Drosophila melanogaster LD46269p pro...    28   9.5  
AY060461-1|AAL25500.1|   80|Drosophila melanogaster SD04019p pro...    28   9.5  
AE014297-2907|AAF55833.2|   80|Drosophila melanogaster CG17278-P...    28   9.5  
AE014134-3350|AAF53971.1|  766|Drosophila melanogaster CG9246-PA...    28   9.5  

>AE014297-408|AAF51914.1|  730|Drosophila melanogaster CG1077-PA
           protein.
          Length = 730

 Score = 35.5 bits (78), Expect = 0.047
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
 Frame = +1

Query: 223 CNHDRVPICGISH-AGDVVGFRDLCDMFDYNCIRRRN---YRQTACPEDKSMLTVSRRP 387
           C+    P+CGIS  +G+   FR  C+M    CI R     +R   CP+  ++  +S +P
Sbjct: 86  CSSRYQPVCGISSKSGERKTFRSRCEMLRTACISRSEWMVHRWGVCPKANAVPQISEKP 144


>BT022460-1|AAY54876.1|  514|Drosophila melanogaster IP11746p
           protein.
          Length = 514

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +1

Query: 349 PEDKSMLTVSRRPTNSYYDD*LNSCPVFLEHFLLCIPFIN 468
           P+D+ M++   RPT S++D   N    F+E  +  +P ++
Sbjct: 475 PDDRQMISTEARPTQSWWDYRRNLTYGFMEDNIFSVPTVD 514


>AE014134-2795|AAF53578.1|  484|Drosophila melanogaster CG13282-PA
           protein.
          Length = 484

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +1

Query: 349 PEDKSMLTVSRRPTNSYYDD*LNSCPVFLEHFLLCIPFIN 468
           P+D+ M++   RPT S++D   N    F+E  +  +P ++
Sbjct: 445 PDDRQMISTEARPTQSWWDYRRNLTYGFMEDNIFSVPTVD 484


>AY061505-1|AAL29053.1|  766|Drosophila melanogaster LD46269p
           protein.
          Length = 766

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 399 IAVCWTTGDS*HRFILGTCCLSVISTSNAVIIEHV 295
           + V W+TGD   R +   C L +     A ++ HV
Sbjct: 315 LVVLWSTGDETVRVLAFLCILKITRKQQATMLNHV 349


>AY060461-1|AAL25500.1|   80|Drosophila melanogaster SD04019p
           protein.
          Length = 80

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +1

Query: 244 ICGISHAGDVVGFRDLCDMFDYNCIRRRNYRQTA---CP 351
           IC     G    +R+LC M   NC++  N+++ +   CP
Sbjct: 42  ICAADDKGSTKTYRNLCVMKTENCLQNANFQKISDKECP 80


>AE014297-2907|AAF55833.2|   80|Drosophila melanogaster CG17278-PA
           protein.
          Length = 80

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +1

Query: 244 ICGISHAGDVVGFRDLCDMFDYNCIRRRNYRQTA---CP 351
           IC     G    +R+LC M   NC++  N+++ +   CP
Sbjct: 42  ICAADDKGSTKTYRNLCVMKTENCLQNANFQKISDKECP 80


>AE014134-3350|AAF53971.1|  766|Drosophila melanogaster CG9246-PA
           protein.
          Length = 766

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 399 IAVCWTTGDS*HRFILGTCCLSVISTSNAVIIEHV 295
           + V W+TGD   R +   C L +     A ++ HV
Sbjct: 315 LVVLWSTGDETVRVLAFLCILKITRKQQATMLNHV 349


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,491,375
Number of Sequences: 53049
Number of extensions: 447544
Number of successful extensions: 1250
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)