Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3k08
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.70 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.0  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   6.6  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   6.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +3

Query: 165  WAARCPGRRHRPRPYVHPGRGGPQVSAPERRCQRQSRGRY 284
            +  +C GR+   + Y  P  GGPQ   P   C   +   Y
Sbjct: 1251 YKVKCVGRKQLAQKYQLPKMGGPQ---PYSACSENAFAAY 1287


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 36  NVISKSRF*TLMNKLKN 86
           NVI K+RF T+ N L+N
Sbjct: 194 NVILKTRFKTINNILEN 210


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 446 SLSEPPRQLKPW 411
           S+SEPP    PW
Sbjct: 160 SVSEPPANFYPW 171


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 446 SLSEPPRQLKPW 411
           S+SEPP    PW
Sbjct: 160 SVSEPPANFYPW 171


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 446 SLSEPPRQLKPW 411
           S+SEPP    PW
Sbjct: 160 SVSEPPANFYPW 171


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 272 PWSLYQLPEPSGKESP 319
           PWSLY    P G+ +P
Sbjct: 356 PWSLYCGEPPCGQLNP 371


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,617
Number of Sequences: 336
Number of extensions: 2589
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)