Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3j23
(538 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z70203-3|CAA94106.2| 219|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81544-8|CAB04433.3| 399|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z81486-13|CAE47465.1| 611|Caenorhabditis elegans Hypothetical p... 28 3.7
U80843-16|AAB37958.1| 327|Caenorhabditis elegans Serpentine rec... 28 3.7
AY221631-1|AAP97492.1| 611|Caenorhabditis elegans muscarinic ac... 28 3.7
AL034391-3|CAE47471.1| 611|Caenorhabditis elegans Hypothetical ... 28 3.7
AF016676-5|AAG24100.1| 473|Caenorhabditis elegans Cytochrome p4... 28 3.7
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 28 4.9
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 27 6.5
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 27 6.5
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p... 27 8.6
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 37.9 bits (84), Expect = 0.005
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 2/147 (1%)
Frame = +3
Query: 81 SQPENDTLSKSNDICQKKPNKVPAEGTDSLELTSYKNPKTWKKSISNFFRNQLRSTKSNE 260
SQP+ + + K K+P KV EG D + S PKT KK S+ F + + E
Sbjct: 1291 SQPKKERVKKEPKE-PKEPKKVKKEGQDIKKFMSPAAPKTAKKEKSDGFNSDMSEESDVE 1349
Query: 261 GDR--PSGSKDNFEEKEITPDQKWQSLGKVFRRQSFAETWNKSPKSPGENSSHSKRLAVK 434
D S D+ E+E + GK + + + + P + + +K+ A K
Sbjct: 1350 FDEGIDFDSDDDGVEREDVVSKPKPRTGKGAAKAEVIDL-SDDDEVPAKKPAPAKKAAPK 1408
Query: 435 KVISSYFGKSQKVTSADGEK*TCTQIK 515
K S + S + + EK T K
Sbjct: 1409 KKKSEFSDLSGGDSDEEAEKKPSTSKK 1435
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 37.9 bits (84), Expect = 0.005
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 2/147 (1%)
Frame = +3
Query: 81 SQPENDTLSKSNDICQKKPNKVPAEGTDSLELTSYKNPKTWKKSISNFFRNQLRSTKSNE 260
SQP+ + + K K+P KV EG D + S PKT KK S+ F + + E
Sbjct: 1291 SQPKKERVKKEPKE-PKEPKKVKKEGQDIKKFMSPAAPKTAKKEKSDGFNSDMSEESDVE 1349
Query: 261 GDR--PSGSKDNFEEKEITPDQKWQSLGKVFRRQSFAETWNKSPKSPGENSSHSKRLAVK 434
D S D+ E+E + GK + + + + P + + +K+ A K
Sbjct: 1350 FDEGIDFDSDDDGVEREDVVSKPKPRTGKGAAKAEVIDL-SDDDEVPAKKPAPAKKAAPK 1408
Query: 435 KVISSYFGKSQKVTSADGEK*TCTQIK 515
K S + S + + EK T K
Sbjct: 1409 KKKSEFSDLSGGDSDEEAEKKPSTSKK 1435
>Z70203-3|CAA94106.2| 219|Caenorhabditis elegans Hypothetical
protein C05G5.3 protein.
Length = 219
Score = 31.1 bits (67), Expect = 0.53
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Frame = +3
Query: 42 N*KKKPEMLCPEGSQPENDTLSKSNDICQKKPNKVPAEGTDSLELTSYKNPKTWKKSISN 221
N KK + PE END K +K N E T+S T ++ ++ +
Sbjct: 57 NIKKNRVIFSPEVC--ENDP-PKERASNSEKDNS--EEKTESESETDEQDEDEEEEQMPQ 111
Query: 222 FFRNQLRSTKSNEGDRPSGSKDNFEEKEITPDQKWQ-SLGKVFRRQSFAETWNKSPKSPG 398
F ++ +T++ D PS S++N KE++ K ++GK+ + + A+ K+ +
Sbjct: 112 FNNRKITNTQNFCPDEPSTSQENPFAKELSDADKMNVTIGKLHGKLATAQLKAKTRQIAA 171
Query: 399 ENSSHSKRLAVK 434
E S+ K K
Sbjct: 172 EMSNEEKEYEAK 183
>Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical
protein K08F4.5 protein.
Length = 215
Score = 28.7 bits (61), Expect = 2.8
Identities = 30/137 (21%), Positives = 59/137 (43%), Gaps = 1/137 (0%)
Frame = +3
Query: 87 PENDTLSKSNDICQKKPNKVPAEGTDSLELTSYKNPKTWKKSISNFFRNQLRSTKSNEGD 266
P + K + +K P K E D+ + K K ++ R + + +S EG+
Sbjct: 61 PAEPVVEKKEEPKEKVPEKKEEEKKDATKKEEAKEEKKEEE------RKEEKKEESKEGE 114
Query: 267 RPSGSKDNFEEKEITPDQKWQSLGKVFRRQSFAETWNKSPKSPGENSSHSKRLAVKKVIS 446
+ K++ EEK+ + D+K + GK + + K G+ ++ K+++
Sbjct: 115 K----KNSGEEKKNSGDEKKEEGGK---KDDAKDGEKKEEAKEGDKKDEDQK-PKKEIVP 166
Query: 447 SYFGKSQKVTS-ADGEK 494
F ++ K + ADG K
Sbjct: 167 EVFKRTSKEKAIADGVK 183
>Z81544-8|CAB04433.3| 399|Caenorhabditis elegans Hypothetical
protein F49C5.4 protein.
Length = 399
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 219 NFFRNQLRSTKSNEGDRPSGSKDNFEEKEITPDQKWQSLGK--VFRRQSFAETWNKSPK 389
+F+ R TKS + + DN EEK+ D+ W+ L + + E +K P+
Sbjct: 281 HFWMRDCRFTKSYLSIKATAKIDNEEEKKAIDDKVWKILNNYGIVKEMIVEENLDKGPR 339
>Z81486-13|CAE47465.1| 611|Caenorhabditis elegans Hypothetical
protein Y40H4A.1b protein.
Length = 611
Score = 28.3 bits (60), Expect = 3.7
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Frame = +3
Query: 180 SYKNPKTWKKSISNFFRNQLR----ST---KSNEGDRPSGSKDNFEEKEITPDQKWQSLG 338
S++N K WKK + F R ++ ST KS+ R ++D + E +TP +
Sbjct: 284 SFRNSKMWKK-VKKFSRRSMKRDVSSTSIIKSSGSMRKKNNQDGYVEDSVTP----CTSS 338
Query: 339 KVFRRQSFAETWNKSPKSPGENSSH--SKRLAVKKVISSYFGKS 464
+ +R+S+ S E+SS + L + SS+F S
Sbjct: 339 RNSKRKSWLRNCTGKSNSSSEDSSEAVAMNLDDTSLSSSHFALS 382
>U80843-16|AAB37958.1| 327|Caenorhabditis elegans Serpentine
receptor, class h protein274 protein.
Length = 327
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 98 IIFRLRAFWAQHFRFFFSVLNF 33
++F +R W +HFR F VLN+
Sbjct: 120 LLFGVRGHWWRHFRITFLVLNY 141
>AY221631-1|AAP97492.1| 611|Caenorhabditis elegans muscarinic
acetylcholine receptorlarge isoform protein.
Length = 611
Score = 28.3 bits (60), Expect = 3.7
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Frame = +3
Query: 180 SYKNPKTWKKSISNFFRNQLR----ST---KSNEGDRPSGSKDNFEEKEITPDQKWQSLG 338
S++N K WKK + F R ++ ST KS+ R ++D + E +TP +
Sbjct: 284 SFRNSKMWKK-VKKFSRRSMKRDVSSTSIIKSSGSMRKKNNQDGYVEDSVTP----CTSS 338
Query: 339 KVFRRQSFAETWNKSPKSPGENSSH--SKRLAVKKVISSYFGKS 464
+ +R+S+ S E+SS + L + SS+F S
Sbjct: 339 RNSKRKSWLRNCTGKSNSSSEDSSEAVAMNLDDTSLSSSHFALS 382
>AL034391-3|CAE47471.1| 611|Caenorhabditis elegans Hypothetical
protein Y40H4A.1b protein.
Length = 611
Score = 28.3 bits (60), Expect = 3.7
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Frame = +3
Query: 180 SYKNPKTWKKSISNFFRNQLR----ST---KSNEGDRPSGSKDNFEEKEITPDQKWQSLG 338
S++N K WKK + F R ++ ST KS+ R ++D + E +TP +
Sbjct: 284 SFRNSKMWKK-VKKFSRRSMKRDVSSTSIIKSSGSMRKKNNQDGYVEDSVTP----CTSS 338
Query: 339 KVFRRQSFAETWNKSPKSPGENSSH--SKRLAVKKVISSYFGKS 464
+ +R+S+ S E+SS + L + SS+F S
Sbjct: 339 RNSKRKSWLRNCTGKSNSSSEDSSEAVAMNLDDTSLSSSHFALS 382
>AF016676-5|AAG24100.1| 473|Caenorhabditis elegans Cytochrome p450
family protein 33C7 protein.
Length = 473
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 195 KTWKKSISNFFRNQLRSTKSNEGDRPSGSKDNFEEKEITPDQKWQSLG--KVFRRQSFAE 368
K WK S +FF Q+ + + + D S ++ E + +K+++LG ++F + +
Sbjct: 235 KDWKNSFYDFFNTQIENHR-QKIDFDSEESQDYAEAYLKEQKKYEALGDTELFSNKQLSN 293
Query: 369 T 371
T
Sbjct: 294 T 294
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 27.9 bits (59), Expect = 4.9
Identities = 24/95 (25%), Positives = 41/95 (43%)
Frame = +3
Query: 39 KN*KKKPEMLCPEGSQPENDTLSKSNDICQKKPNKVPAEGTDSLELTSYKNPKTWKKSIS 218
K+ +K E E ++ E K D +KK +K + + + K+ K KK S
Sbjct: 62 KDEEKDKEEAEKEKNEKEKKEEEKKEDGHEKKEDKKEDKKENENDEKKEKS-KDDKKEES 120
Query: 219 NFFRNQLRSTKSNEGDRPSGSKDNFEEKEITPDQK 323
+ + T+ NEG K+ EEK+ ++K
Sbjct: 121 KEDKKEKTKTEDNEGKNEEKKKEKKEEKKDEKEKK 155
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 27.9 bits (59), Expect = 4.9
Identities = 23/126 (18%), Positives = 50/126 (39%)
Frame = +3
Query: 6 IILDLLNCEKIKN*KKKPEMLCPEGSQPENDTLSKSNDICQKKPNKVPAEGTDSLELTSY 185
++ L+N +K++ K E+ C E +K+N I K ++L +
Sbjct: 436 LLNSLINEQKMELEMLKAEIRCLRSYSQEMSQSNKNNIILLKSAETERKSLLETLTVLLN 495
Query: 186 KNPKTWKKSISNFFRNQLRSTKSNEGDRPSGSKDNFEEKEITPDQKWQSLGKVFRRQSFA 365
+ + ++ R+ +R + + R K + + +Q Q +FR +
Sbjct: 496 SEEEATENNVKRTIRDLVRERDTEQTKRFEAEKAASNAEGVLLEQAKQQRNALFRARVSE 555
Query: 366 ETWNKS 383
E ++KS
Sbjct: 556 EEYSKS 561
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 27.5 bits (58), Expect = 6.5
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Frame = +3
Query: 48 KKKPEMLCPEGSQPENDTLSKSNDICQKKPNKVPAEGTDSLELTSYKNPKTWKKSISNFF 227
KK+ E E ++ KS+ +K+ K +E +S E K K+ KK +
Sbjct: 57 KKRKASSSEEDDDDEEESPRKSSKKSRKRA-KSESESDESDEEEDRKKSKS-KKKVD--- 111
Query: 228 RNQLRSTKSNEGDRPSGSKDNFEEKEITPDQKWQSLGKVFRRQSFAETWNKSPKS-PGEN 404
+ + +K S +D+ EE+E QK + K ++Q+ +E+ +S + +
Sbjct: 112 QKKKEKSKKKRTTSSSEDEDSDEERE----QKSKKKSKKTKKQTSSESSEESEEERKVKK 167
Query: 405 SSHSKRLAVKK 437
S +K +VKK
Sbjct: 168 SKKNKEKSVKK 178
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 27.5 bits (58), Expect = 6.5
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Frame = +3
Query: 48 KKKPEMLCPEGSQPENDTLSKSNDICQKKPNKVPAEGTDSLELTSYKNPKTWKKSISNFF 227
KK+ E E ++ KS+ +K+ K +E +S E K K+ KK +
Sbjct: 57 KKRKASSSEEDDDDEEESPRKSSKKSRKRA-KSESESDESDEEEDRKKSKS-KKKVD--- 111
Query: 228 RNQLRSTKSNEGDRPSGSKDNFEEKEITPDQKWQSLGKVFRRQSFAETWNKSPKS-PGEN 404
+ + +K S +D+ EE+E QK + K ++Q+ +E+ +S + +
Sbjct: 112 QKKKEKSKKKRTTSSSEDEDSDEERE----QKSKKKSKKTKKQTSSESSEESEEERKVKK 167
Query: 405 SSHSKRLAVKK 437
S +K +VKK
Sbjct: 168 SKKNKEKSVKK 178
>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
protein Y41E3.9 protein.
Length = 1440
Score = 27.1 bits (57), Expect = 8.6
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 320 KVAIFGESISSSKLCRNVEQ 379
K +FG +++S LCRN+E+
Sbjct: 103 KCVVFGNNLNSEDLCRNLEK 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,345,552
Number of Sequences: 27780
Number of extensions: 259428
Number of successful extensions: 833
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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