Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3j19
(261 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82278-10|CAC15860.2| 390|Caenorhabditis elegans Hypothetical p... 30 0.26
AL132943-14|CAC14395.2| 390|Caenorhabditis elegans Hypothetical... 30 0.26
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 0.60
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 28 0.79
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 27 1.8
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 27 1.8
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 26 4.2
U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 25 5.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 25 5.6
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 25 5.6
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 25 5.6
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 25 5.6
Z93383-1|CAB07622.1| 150|Caenorhabditis elegans Hypothetical pr... 25 7.4
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 25 7.4
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 25 7.4
AF016688-1|AAB66077.3| 700|Caenorhabditis elegans Hypothetical ... 25 7.4
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 25 9.8
Z35604-3|CAA84679.1| 352|Caenorhabditis elegans Hypothetical pr... 25 9.8
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 25 9.8
>Z82278-10|CAC15860.2| 390|Caenorhabditis elegans Hypothetical
protein Y116F11B.2 protein.
Length = 390
Score = 29.9 bits (64), Expect = 0.26
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 28 FXTLQVYKLKK*KMGYCPPVCSPPDCRPIXGPASPLXCQSXXPPTRRCY-PVNPCIXIYS 204
F T + L +C P+ PDC + P++ C + T Y V+ CI ++
Sbjct: 277 FDTFKCKNLPALTCTFCLPMVYNPDCYGVDNPSNTDWCYTEAEVTVNYYRDVDTCIAAFT 336
Query: 205 C 207
C
Sbjct: 337 C 337
>AL132943-14|CAC14395.2| 390|Caenorhabditis elegans Hypothetical
protein Y116F11B.2 protein.
Length = 390
Score = 29.9 bits (64), Expect = 0.26
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 28 FXTLQVYKLKK*KMGYCPPVCSPPDCRPIXGPASPLXCQSXXPPTRRCY-PVNPCIXIYS 204
F T + L +C P+ PDC + P++ C + T Y V+ CI ++
Sbjct: 277 FDTFKCKNLPALTCTFCLPMVYNPDCYGVDNPSNTDWCYTEAEVTVNYYRDVDTCIAAFT 336
Query: 205 C 207
C
Sbjct: 337 C 337
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 0.60
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +1
Query: 82 PVCSPPDCRPIXGPASPLXCQSXXPPTRRCYPVNPCIXIYSC 207
PVC PP P P C PP C P P + SC
Sbjct: 52 PVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSC 93
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 79 PPVCSPPDCRPIXGPASPLXCQSXXPPTRRCYPVNPCI 192
PP+C PP P P+ C PP R P PC+
Sbjct: 68 PPICPPP-------PPPPMPCPPPPPPMPR--PSCPCM 96
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 28.3 bits (60), Expect = 0.79
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 76 CPPVCSPPDCRPIXGPASPLXCQSXXPPTRRCYPVNPCIXIYSCYTQ 216
C P C P C+P PL Q+ P +C P + SC Q
Sbjct: 372 CVPSCMPA-CQPSCTNPVPLTTQAPVPVVNQCIPPCQPQCLQSCLEQ 417
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 73 YCPPVCSPPDCRPIXGPASPLXCQSXXPP 159
+CPP PP C P P P C PP
Sbjct: 55 FCPP---PPMCPPPPPPPPPPMCPPPPPP 80
Score = 25.4 bits (53), Expect = 5.6
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +1
Query: 76 CPPVCSPPDCRPIXGPASPL-XCQSXXPPTRRCYPVNPCIXIYS 204
CPP PP C P P P+ PP C P P + YS
Sbjct: 45 CPP---PPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYS 85
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +1
Query: 79 PPVCSPPDCRPIXGPASPLXCQSXXPPTRRCYPVNPCIXIYSC 207
P C+ P+CRP+ P C + P + + C I SC
Sbjct: 1255 PVKCTTPECRPV-AKCIPNMCGTGEPLALENHLLATCSPISSC 1296
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 79 PPVCSPPDCRPIXGPASPLXCQSXXPPTRRCYPVNP 186
P VCS P P A P+ C + P RC + P
Sbjct: 182 PCVCSAPRPVPCRCGAPPMECPNCDMPAPRCSMMAP 217
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = +1
Query: 73 YCPPVCSPPDCRPIXGPASPLXCQSXXPPTRRCYP 177
Y P +P C+P PA C P +C P
Sbjct: 119 YTPTTPAPVQCQPSCMPACEQSCVVQTPAAVQCVP 153
>U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical
protein F22H10.3 protein.
Length = 79
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 67 MGYCPPVCSPPDCRPIXGPASPL 135
MGY PP+ P P+ P +P+
Sbjct: 23 MGYAPPIAPIPMVAPMPVPVAPM 45
>Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical
protein T06E6.10 protein.
Length = 249
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +1
Query: 70 GYCPPVCSPPDCRPIXGPASPLXCQSXXPPTRRCYPVNPCIXI 198
G C V S PDC P P + T+ C P C+ +
Sbjct: 32 GGCGMVASCPDCEP-----GPECLEKNDCNTKSCAPTEECVLV 69
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = +1
Query: 73 YCPPVCSPPDCRPIXGPASPLXCQSXXPPTRRCYP 177
Y P +P C+P PA C P +C P
Sbjct: 119 YTPTTPAPVQCQPSCMPACEQSCVVQTPAPVQCVP 153
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 79 PPVCSPPDCRPIXGPASPLXCQSXXPPTRRCYPVNP 186
PP SPP RP P SP PP+ P NP
Sbjct: 150 PPPRSPPPRRPPMTPPSPQRRPPRTPPSPE--PRNP 183
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 109 PIXGPASPLXCQSXXPPTRRCYPVNPC 189
PI PAS + +S P TRR P PC
Sbjct: 2 PILTPASTVSSKSSAPATRR--PSRPC 26
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 109 PIXGPASPLXCQSXXPPTRRCYPVNPC 189
PI PAS + +S P TRR P PC
Sbjct: 1381 PILTPASTVSSKSSAPATRR--PSRPC 1405
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 25.4 bits (53), Expect = 5.6
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
Frame = +1
Query: 76 CP---PVCSPPDCRPIXGPASPLXCQSXXPPTRRCYPV--NPCIXI 198
CP PVC+ P C P P P + P YP PCI +
Sbjct: 29 CPEPMPVCATPPCPPQYAPLPPPPMPA-PAPAYNPYPCANPPCIVV 73
>Z93383-1|CAB07622.1| 150|Caenorhabditis elegans Hypothetical
protein F54B8.1 protein.
Length = 150
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 112 IXGPASPLXCQSXXPPTRRCYPVNPCIXIYS 204
I G + + Q PPT +P N C IY+
Sbjct: 12 IEGLLACIPTQQIEPPTEAPFPCNVCSKIYN 42
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 91 SPPDCRPIXGPASPLXCQSXXPPTRRCYP 177
+P C+P PA C + P T +C P
Sbjct: 124 APVQCQPSCMPACEQSCVAPAPVTVQCVP 152
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 91 SPPDCRPIXGPASPLXCQSXXPPTRRCYP 177
+P C+P PA C + P T +C P
Sbjct: 125 APVQCQPSCMPACEQSCVAPAPVTVQCVP 153
>AF016688-1|AAB66077.3| 700|Caenorhabditis elegans Hypothetical
protein F18A12.5 protein.
Length = 700
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -3
Query: 109 DDNPEVNRLVDNNPFFT--FLIYRLVKXKKL 23
D ++ ++DN+PFFT L++ + KKL
Sbjct: 395 DLKTKITEMIDNSPFFTKFHLVFDAEEQKKL 425
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = +1
Query: 79 PPVCSPPDCRPIXGPASPLXCQSXXPPTRRCYPVNP 186
PP P P P + + PP + YP NP
Sbjct: 175 PPQQPPSTSAPHSSPNNRTSLYNPQPPPKTGYPTNP 210
>Z35604-3|CAA84679.1| 352|Caenorhabditis elegans Hypothetical
protein ZK1058.3 protein.
Length = 352
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 168 VLSCKSLHXHIQLLHSNYV 224
V+ C ++H H QL SNY+
Sbjct: 158 VVGCSNMHPHGQLWASNYL 176
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
Frame = +1
Query: 76 CPPVCSP-PDCRPIXGPASP 132
CPP P P C+P GP P
Sbjct: 72 CPPPPPPKPCCQPAFGPCCP 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,640,115
Number of Sequences: 27780
Number of extensions: 74447
Number of successful extensions: 256
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 12,740,198
effective HSP length: 65
effective length of database: 10,934,498
effective search space used: 229624458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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