Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3j12
         (433 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF275813-1|AAG23823.1|   63|Homo sapiens PNAS-117 protein.             35   0.14 

>AF275813-1|AAG23823.1|   63|Homo sapiens PNAS-117 protein.
          Length = 63

 Score = 34.7 bits (76), Expect = 0.14
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +1

Query: 106 MNLKQFTTKNAVLLIMIPALGGLHYGWYKLQS 201
           M+L+       VL++M+P +G +H GWY+++S
Sbjct: 1   MSLRNLWRDYKVLVVMVPLVGLIHLGWYRIKS 32


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,492,982
Number of Sequences: 237096
Number of extensions: 1037430
Number of successful extensions: 5334
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5334
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)