BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3j10
(721 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 25 0.54
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 24 1.7
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 2.9
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 2.9
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 2.9
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 2.9
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 2.9
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 2.9
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 2.9
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 2.9
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 2.9
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 2.9
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 5.1
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 5.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 8.9
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 8.9
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 25.4 bits (53), Expect = 0.54
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 283 EPTPKKLAPVEPVYTPQPPVMNFVD 357
E PKK+ +P PQ +NFVD
Sbjct: 306 EKDPKKMPCTQPPSAPQNLTVNFVD 330
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 23.8 bits (49), Expect = 1.7
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -1
Query: 586 YQDFHQWVVPFVSC 545
Y D +QWV P C
Sbjct: 290 YDDINQWVYPLTGC 303
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 102 KKKRSKRPKTIN*NKFTRNLASPKNDANHRHK 7
+++RSK PK I+ N N + N+ N+ +K
Sbjct: 72 ERERSKEPKIISNNNSLSNNYNYNNNYNNYNK 103
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 102 KKKRSKRPKTIN*NKFTRNLASPKNDANHRHK 7
+++RSK PK I+ N N + N+ N+ +K
Sbjct: 72 ERERSKEPKIISNNNSLSNNYNYNNNYNNYNK 103
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 102 KKKRSKRPKTIN*NKFTRNLASPKNDANHRHK 7
+++RSK PK I+ N N + N+ N+ +K
Sbjct: 72 ERERSKEPKIISNNNSLSNNYNYNNNYNNYNK 103
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 102 KKKRSKRPKTIN*NKFTRNLASPKNDANHRHK 7
+++RSK PK I+ N N + N+ N+ +K
Sbjct: 72 ERERSKEPKIISNNNSLSNNYNYNNNYNNYNK 103
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 102 KKKRSKRPKTIN*NKFTRNLASPKNDANHRHK 7
+++RSK PK I+ N N + N+ N+ +K
Sbjct: 72 ERERSKEPKIISNNNSLSNNYNYNNNYNNYNK 103
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 102 KKKRSKRPKTIN*NKFTRNLASPKNDANHRHK 7
+++RSK PK I+ N N + N+ N+ +K
Sbjct: 72 ERERSKEPKIISNNNSLSNNYNYNNNYNNYNK 103
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 102 KKKRSKRPKTIN*NKFTRNLASPKNDANHRHK 7
+++RSK PK I+ N N + N+ N+ +K
Sbjct: 72 ERERSKEPKIISNNNSLSNNYNYNNNYNNYNK 103
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 102 KKKRSKRPKTIN*NKFTRNLASPKNDANHRHK 7
+++RSK PK I+ N N + N+ N+ +K
Sbjct: 72 ERERSKEPKIISNNNSLSNNYNYNNNYNNYNK 103
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 102 KKKRSKRPKTIN*NKFTRNLASPKNDANHRHK 7
+++RSK PK I+ N N + N+ N+ +K
Sbjct: 305 ERERSKEPKIISNNNSLSNNYNYNNNYNNYNK 336
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 2.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 102 KKKRSKRPKTIN*NKFTRNLASPKNDANHRHK 7
+++RSK PK I+ N N + N+ N+ +K
Sbjct: 305 ERERSKEPKIISNNNSLSNNYNYNNNYNNYNK 336
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 102 KKKRSKRPKTIN*NKFTRNLASPKNDANHRHK 7
+++RSK PK I+ N N + N+ N+ +K
Sbjct: 72 ERERSKEPKIISNNNPLSNNYNYNNNYNNYNK 103
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.1
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 102 KKKRSKRPKTIN*NKFTRNLASPKNDANHRHKRF 1
+++RSK PK I+ N N + N+ N+ + +
Sbjct: 72 ERERSKEPKIISNNNSLSNNYNYNNNYNNYNNNY 105
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 8.9
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1
Query: 577 FHQWVVPFVSCNRIL 533
FH VVPFVS + IL
Sbjct: 1034 FHYSVVPFVSNHDIL 1048
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3
Query: 626 LCIASLEPVSVHSLSGFPSV 567
+CIA+ E + +H + PSV
Sbjct: 194 VCIATPEAIELHFTTDHPSV 213
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,573
Number of Sequences: 438
Number of extensions: 3841
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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