Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3j08
(714 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5CV17 Cluster: Putative uncharacterized protein; n=1; ... 43 0.009
UniRef50_UPI00015A6A91 Cluster: UPI00015A6A91 related cluster; n... 41 0.026
UniRef50_Q0VPG4 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_Q6E795 Cluster: Sec-independent transporter protein; n=... 34 3.0
UniRef50_Q6ZSJ0 Cluster: CDNA FLJ45488 fis, clone BRTHA2003759; ... 34 3.0
UniRef50_Q8FA10 Cluster: Adenylate cyclase; n=4; Leptospira|Rep:... 33 5.3
UniRef50_Q9XMS2 Cluster: Orf1386; n=2; Alveolata|Rep: Orf1386 - ... 33 5.3
UniRef50_Q8IJF6 Cluster: Putative uncharacterized protein; n=4; ... 33 5.3
UniRef50_Q8IEN1 Cluster: Putative uncharacterized protein MAL13P... 33 5.3
UniRef50_Q4FKT2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_A0E2J4 Cluster: Chromosome undetermined scaffold_75, wh... 33 5.3
UniRef50_A6RZZ8 Cluster: Putative uncharacterized protein; n=2; ... 33 5.3
UniRef50_UPI0000D9E51C Cluster: PREDICTED: hypothetical protein;... 33 7.0
UniRef50_UPI00004993BF Cluster: hypothetical protein 1.t00034; n... 33 7.0
UniRef50_UPI000069FCBF Cluster: UPI000069FCBF related cluster; n... 33 7.0
UniRef50_Q6LEZ3 Cluster: Plasmodium falciparum chromosome 6, com... 33 7.0
UniRef50_Q4Z0S0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_Q9G8N7 Cluster: Haem lyase; n=1; Naegleria gruberi|Rep:... 33 9.2
UniRef50_Q8IBW3 Cluster: Putative uncharacterized protein MAL7P1... 33 9.2
UniRef50_Q8I475 Cluster: Putative uncharacterized protein PFE012... 33 9.2
UniRef50_Q4X2U2 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
UniRef50_Q1ZXA2 Cluster: Myb domain-containing protein; n=1; Dic... 33 9.2
UniRef50_O97264 Cluster: Putative uncharacterized protein MAL3P5... 33 9.2
UniRef50_O47572 Cluster: NADH-ubiquinone oxidoreductase chain 4;... 33 9.2
>UniRef50_Q5CV17 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 242
Score = 42.7 bits (96), Expect = 0.009
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Frame = +1
Query: 22 HVFFILYLLHRVFIFIIIPYHV-------*LSIKIIQSLHLYF*NLLSNIYLLFSLH--- 171
H+FFIL+ L +F+ + I H+ L I + + L+ LL I LF L
Sbjct: 76 HLFFILFFLRFLFVLLFILCHLFILHLLFVLFILCLLFIFLFILCLLFFIRFLFFLRFLF 135
Query: 172 TLH*NSHELFILKLVSVSVSCSYTNLIKYTIVLFSLCFNIVLQLVVYINFVMNEMILLII 351
L H LFIL L+ V I++ VLF LC +L L +++ F++ + L +
Sbjct: 136 VLFILCH-LFILHLLFVLFIICLLFFIRFLFVLFILCHLFILHL-LFVLFILCLLSFLYL 193
Query: 352 PFSFLRLIHIV 384
FS L +H +
Sbjct: 194 LFSLLFFLHFL 204
>UniRef50_UPI00015A6A91 Cluster: UPI00015A6A91 related cluster; n=1;
Danio rerio|Rep: UPI00015A6A91 UniRef100 entry - Danio
rerio
Length = 384
Score = 41.1 bits (92), Expect = 0.026
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Frame = +1
Query: 13 TSFHVFFILYLLHRVFIFIIIPYHV*LSIKIIQSLHLYF*NLLSNIYLLFSLH--TLH*N 186
T F +F I+Y++H +F F+ I +H S +L+ + L Y F LH TL
Sbjct: 12 TPFLLFAIIYIMHPLFAFVYIMHHSICIYLHYASFYLHIFHCLCLQYAFFYLHLFTLCII 71
Query: 187 SHELFILKLVSVSVSCSYTN--LIKYTIVLFSLCFNIVLQLVV-----YINFVMNEMILL 345
+ + SV ++ Y + L +T+ +F F ++ + Y +F + L
Sbjct: 72 LFAIVYIIYHSVCINLHYASFYLHLFTLCIFLFAFIYIMHHFICIYLHYSSFYLRLFTLC 131
Query: 346 IIPFSFLRLIH 378
I+ F+F+ ++H
Sbjct: 132 ILLFAFIYIMH 142
>UniRef50_Q0VPG4 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 342
Score = 35.1 bits (77), Expect = 1.7
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 437 LYECFYNYFFTLLYSH-LFYTLCFHFLYYATFNSIRLIIEISQYTSKFILFSTFYH 601
L F+N++ ++S LFY LCF +Y F +IR I+ I+++T F F H
Sbjct: 54 LVPAFHNFYRDTIHSDFLFYDLCFVAVYLTEF-TIRWIVAIARHTYHRWFFYPFAH 108
>UniRef50_Q6E795 Cluster: Sec-independent transporter protein; n=1;
Saprolegnia ferax|Rep: Sec-independent transporter
protein - Saprolegnia ferax
Length = 244
Score = 34.3 bits (75), Expect = 3.0
Identities = 22/78 (28%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +1
Query: 10 FTSFHVFFILYLLHRVFIFIIIPYHV*LSIKI-IQSLHLYF*NLLSNIYLLFSLHTLH*N 186
FT F +I+++ +F F+II Y+V ++I+I I++ ++++ +LL +L+ L ++
Sbjct: 162 FTFFIYIYIIFICLFIFYFLII-YNV-INIEILIKNRNIFYFSLLLITFLIIPLDLINQA 219
Query: 187 SHELFILKLVSVSVSCSY 240
+ L IL ++ + + SY
Sbjct: 220 LYFLLILIIIEIYIYISY 237
>UniRef50_Q6ZSJ0 Cluster: CDNA FLJ45488 fis, clone BRTHA2003759;
n=2; Homo sapiens|Rep: CDNA FLJ45488 fis, clone
BRTHA2003759 - Homo sapiens (Human)
Length = 130
Score = 34.3 bits (75), Expect = 3.0
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 490 LHSLFSFFILCYLQQYSFNY*NLSIHIKVYLVFYFLSLTYIKNIPIFYFIYNISSILVE* 669
L+ F+ ++ Y F Y + +++ +YL YF TYI + IF +IY I +
Sbjct: 5 LYVYIYMFMYIFIFIYIFIYIYIYVYVYIYLYIYFYIFTYI-YLYIFIYIYICLYIYLYI 63
Query: 670 XKYFITK-KTYLNLFI 714
Y T YL++FI
Sbjct: 64 YLYIFTYIYIYLHIFI 79
>UniRef50_Q8FA10 Cluster: Adenylate cyclase; n=4; Leptospira|Rep:
Adenylate cyclase - Leptospira interrogans
Length = 758
Score = 33.5 bits (73), Expect = 5.3
Identities = 26/112 (23%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Frame = +1
Query: 28 FFILYLLHRVFIFIIIPYH-V*LSIKIIQSLHLYF*NLLSNIYLL-FSLHTLH*NSHELF 201
FF+++L+ F F+ +P+ V ++ KI Q L + F ++Y+L FS+ T+ +
Sbjct: 335 FFVIFLIGLFFAFLTVPFSWVHIAFKICQILAICF-----SVYILFFSIQTVRKKKQDAR 389
Query: 202 ILKLVSVSVSCSYTNLIKYTIVLFSLCFNIVLQLVVYINFVMNEMILLIIPF 357
+ LV + V ++ Y V + ++ +VY+ F+++ L++ +
Sbjct: 390 KI-LVGICVCIVFSTWELYGSVFENAKYHSTFFKLVYLFFIISIASTLVLRY 440
>UniRef50_Q9XMS2 Cluster: Orf1386; n=2; Alveolata|Rep: Orf1386 -
Tetrahymena pyriformis
Length = 1386
Score = 33.5 bits (73), Expect = 5.3
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +1
Query: 538 SFNY*NLSIHIKVYLVFYFLSLTYIKNIPIFYFIYNI 648
S+NY + I+IK Y+ Y L YI NI ++ FIYNI
Sbjct: 281 SYNY--IHIYIKKYI--YILLYRYIYNINVYIFIYNI 313
>UniRef50_Q8IJF6 Cluster: Putative uncharacterized protein; n=4;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1541
Score = 33.5 bits (73), Expect = 5.3
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +2
Query: 431 YLLYECFYNYFFTLLYSHLF--YTLCFHFLYYAT-FNSIRLIIEISQYTSKFILF 586
++L+ Y++FF ++ +F + F FL YAT F I ++ Q +KF++F
Sbjct: 33 FILFNLIYSFFFFFIFIFIFISFFFFFFFLLYATLFFLIIILFNKMQIPTKFLVF 87
>UniRef50_Q8IEN1 Cluster: Putative uncharacterized protein MAL13P1.39;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL13P1.39 - Plasmodium
falciparum (isolate 3D7)
Length = 6088
Score = 33.5 bits (73), Expect = 5.3
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +1
Query: 502 FSFFIL-CYLQQYSFNY*NLSIHIKVYLVF----YFLSLTYIKNIPIFYFIYNISSIL 660
++F IL C L +YS+N N+ + +V +F Y S Y KNI F YNI +I+
Sbjct: 1883 YTFTILNCLLIKYSYNKNNVEVRRRVLFLFSEFLYINSKYYYKNILHFLEKYNIDNII 1940
>UniRef50_Q4FKT2 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 130
Score = 33.5 bits (73), Expect = 5.3
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +2
Query: 431 YLLYECFYNYFFTLLYSHLFYTLCFHFLYYATFNSIRLI----IEISQYTSKFILFSTFY 598
Y Y +Y Y++ + H TL +H+ +Y +F + L + + + TS F S +Y
Sbjct: 68 YYYYYYYYYYYYYYIRIHTLATLSYHYRHYCSFCHVTLTDIYKLNMIRKTSIFYFLSPYY 127
>UniRef50_A0E2J4 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 309
Score = 33.5 bits (73), Expect = 5.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 431 YLLYECFYNYFFTLLYSHLFYTLCFHFLYYATFNSI 538
YLL N TL + +Y CF+FL+Y FN +
Sbjct: 15 YLLTSSTENQIVTLEFDSQYYNPCFYFLHYQLFNHV 50
>UniRef50_A6RZZ8 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 695
Score = 33.5 bits (73), Expect = 5.3
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +2
Query: 431 YLLYECFYNYFFTLLYSHLFYTLCFHFLYYATFNSIRLIIEISQYTSKFILFSTF 595
Y Y +Y Y++ Y + +Y +++ YY L+ ++SQ +F + F
Sbjct: 641 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYTFDFHLLTKVSQEILRFTIMLLF 695
>UniRef50_UPI0000D9E51C Cluster: PREDICTED: hypothetical protein;
n=2; Eutheria|Rep: PREDICTED: hypothetical protein -
Macaca mulatta
Length = 589
Score = 33.1 bits (72), Expect = 7.0
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +1
Query: 1 FLHFTSFHVFFILYLLHRVFIFIIIPYHV*LSIKI---IQSLHLYF*NLLSNIYLLFSLH 171
++H S HV+ +Y+ ++ I I I H+ + I I QS+H+Y ++ I++ +H
Sbjct: 407 YIHIQSIHVYIHIYIHIKICIHIYIHIHIYIHIHIHIHFQSVHIYI-HICIYIHIHIYIH 465
Query: 172 TLH*NSH 192
+H +H
Sbjct: 466 -IHIYTH 471
>UniRef50_UPI00004993BF Cluster: hypothetical protein 1.t00034; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 1.t00034 - Entamoeba histolytica HM-1:IMSS
Length = 496
Score = 33.1 bits (72), Expect = 7.0
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 10 FTSFHVFFILYLLHRVFIF---IIIPYHV*LSIKIIQSLHLYF*NLLSNIYLLFSLHTLH 180
FT+++ ++Y+L V +I+ H+ I SL YF +L+ +YL +SL H
Sbjct: 410 FTNYYTVVLMYILSIVIFIQLDLILKTHIKSDNPIKTSLSFYFISLVCTLYLSYSLVESH 469
Query: 181 *NSHELFILKLVSVSVS 231
N F + V++ +S
Sbjct: 470 -NLSSFFSVTTVTLLLS 485
>UniRef50_UPI000069FCBF Cluster: UPI000069FCBF related cluster; n=1;
Xenopus tropicalis|Rep: UPI000069FCBF UniRef100 entry -
Xenopus tropicalis
Length = 343
Score = 33.1 bits (72), Expect = 7.0
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +1
Query: 499 LFSFFILCYLQQYSFNY*NLSIHIKVYLVFYFLSLTYIKNIPIFYFIYNIS 651
++ + + YL Y Y +LSI++ +YL Y LS+ ++ Y IY++S
Sbjct: 257 IYIYLSIIYLSIYLSIY-HLSIYLSIYLSIYHLSIYHLSIYLSIYLIYHLS 306
>UniRef50_Q6LEZ3 Cluster: Plasmodium falciparum chromosome 6, complete
sequence; segment 4/5; n=18; root|Rep: Plasmodium
falciparum chromosome 6, complete sequence; segment 4/5 -
Plasmodium falciparum (isolate 3D7)
Length = 10287
Score = 33.1 bits (72), Expect = 7.0
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 438 SKYSERNISLEEKGNSNKNNMNEP*EREGNY 346
S YS +NI E+K N N+M+ P + EG+Y
Sbjct: 7253 SHYSNKNIIEEKKQKENSNDMHNPKKNEGHY 7283
>UniRef50_Q4Z0S0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 103
Score = 33.1 bits (72), Expect = 7.0
Identities = 27/112 (24%), Positives = 56/112 (50%)
Frame = +1
Query: 22 HVFFILYLLHRVFIFIIIPYHV*LSIKIIQSLHLYF*NLLSNIYLLFSLHTLH*NSHELF 201
H FF+LYL ++IF+I+ Y+ + I +I +++ + N L +++ +HT ++
Sbjct: 3 HYFFLLYLKPALWIFLIM-YNS-IYINLILNMYTIYFNFL---WIIKCMHTY------IY 51
Query: 202 ILKLVSVSVSCSYTNLIKYTIVLFSLCFNIVLQLVVYINFVMNEMILLIIPF 357
I +++ + IKY +L N +L L Y N + + + ++ F
Sbjct: 52 IYRIICMFAQIGDNYYIKYIYIL-----NNLLILYPYFNIFITSIFICVLHF 98
>UniRef50_Q9G8N7 Cluster: Haem lyase; n=1; Naegleria gruberi|Rep:
Haem lyase - Naegleria gruberi
Length = 474
Score = 32.7 bits (71), Expect = 9.2
Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Frame = +1
Query: 1 FLHFTSFHVFFILYL-LHRVFIFIIIPYHV*LSIKIIQSLHLYF*NLLSNIYLLFSLH-T 174
F +F S H+F I+Y+ L FI I I + + + + IQ Y N+ NI L+ ++
Sbjct: 214 FNNFQSIHIFKIIYINLQIDFIIIYIIFSL-IFLYNIQKNKKY--NIKFNIVLVVNISIA 270
Query: 175 LH*NSHELFILKLVSVSVSCSYTNLIKYTIVLFSLCFNIVLQLVVYINFVMNEMILLIIP 354
+ ++I V++++ Y L+ Y +L + F V++L Y+ V + + L+ I
Sbjct: 271 IIVFFFTIYIYIYVNINIIFMYYILV-YLSILLCILFYYVIRL-DYVYLVCSSIYLICI- 327
Query: 355 FSFLRLIHI 381
F ++ I+I
Sbjct: 328 FFYINNIYI 336
>UniRef50_Q8IBW3 Cluster: Putative uncharacterized protein
MAL7P1.64; n=5; Plasmodium|Rep: Putative uncharacterized
protein MAL7P1.64 - Plasmodium falciparum (isolate 3D7)
Length = 357
Score = 32.7 bits (71), Expect = 9.2
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +1
Query: 487 FLHSLFSFFILCYLQQYSFNY*NLSIHIKVYLVFYFLSLTYIKNIPIF 630
+L +F+ ++ Y +S++ + ++ ++ L +F+SLTYIK +F
Sbjct: 307 YLFIIFTSSVIFYFSVFSYSIKDQFVNFQITLWLFFISLTYIKKNQLF 354
>UniRef50_Q8I475 Cluster: Putative uncharacterized protein PFE0125w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFE0125w - Plasmodium falciparum
(isolate 3D7)
Length = 594
Score = 32.7 bits (71), Expect = 9.2
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 571 KVYLVFYFLSLTYIKNIPIFYFIYNI 648
K+Y +FYF+++ Y NI I ++YNI
Sbjct: 446 KIYRIFYFINIFYNLNIEITKYLYNI 471
>UniRef50_Q4X2U2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 135
Score = 32.7 bits (71), Expect = 9.2
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Frame = +1
Query: 4 LHFTSFHVFFILYLLHRVFIFIIIPYHV*LSIKIIQSLHLY-F*NLLSNIYLLFSLHTLH 180
LH S+ FF Y L I +++P + L I +++ H Y F + +L T H
Sbjct: 7 LHLFSYIFFFFFYRLIFQTIAVVLPRILVLCI-YLRTYHFYVFFKITLFTFLCVYFITCH 65
Query: 181 *NSHELFILKLVSVSVSCSYTNLIKYTIVLFSLCFNIVLQLVVYINFVMNEMILLIIPFS 360
H F+ ++S YT ++ I++F + V+ L+ +I+ +++ +I
Sbjct: 66 --YHYTFL-----QNISKFYTAFLQVIIIIFCYIHSYVILLLCFIDTLISSYYSYVIFLK 118
Query: 361 FL 366
FL
Sbjct: 119 FL 120
>UniRef50_Q1ZXA2 Cluster: Myb domain-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: Myb domain-containing
protein - Dictyostelium discoideum AX4
Length = 1212
Score = 32.7 bits (71), Expect = 9.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 571 KVYLVFYFLSLTYIKNIPIFYFIYNISSIL 660
K +++FYF+ YI N+ IF+F + S IL
Sbjct: 903 KYFILFYFIFYKYIINLIIFFFFFFFSKIL 932
>UniRef50_O97264 Cluster: Putative uncharacterized protein
MAL3P5.11; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL3P5.11 - Plasmodium
falciparum (isolate 3D7)
Length = 611
Score = 32.7 bits (71), Expect = 9.2
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Frame = +1
Query: 235 SYTNLIKYTIVLFSLCFNIVLQLVVYI-----NFVMNEMILLIIP-FSFLRLIHIVL 387
S + +I+Y IVLF +C+ + L + +Y+ + ++L IP F F+ I VL
Sbjct: 475 SISRIIRYIIVLFKICYKVTLPIFLYLLSCLFIIIFRIFVILNIPIFFFILYIKFVL 531
>UniRef50_O47572 Cluster: NADH-ubiquinone oxidoreductase chain 4;
n=3; Onchocercidae|Rep: NADH-ubiquinone oxidoreductase
chain 4 - Onchocerca volvulus
Length = 410
Score = 32.7 bits (71), Expect = 9.2
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 434 LLYECFYNYFFTLLYSHLFYTLCFHFLYYATFNSIRLIIEISQ-YTSKFILFSTFYHLLT 610
+ Y F+ + LYSH+F+ L +F+YY F S I +S + KF ++ F+H+
Sbjct: 126 IFYTLFFGMPYLFLYSHVFFFL--NFVYYDFFVSYEFIFLLSLCFLVKFPVY--FFHVWL 181
Query: 611 SK 616
K
Sbjct: 182 PK 183
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,218,378
Number of Sequences: 1657284
Number of extensions: 8064329
Number of successful extensions: 28466
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28137
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -