Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3j04
(754 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0638 - 30768546-30768779,30768908-30769017,30769301-307694... 88 3e-37
08_02_1226 + 25394106-25394168,25394243-25394396,25394548-253946... 119 2e-27
01_01_0336 + 2712412-2712576,2713663-2713738,2713840-2713898,271... 79 4e-15
04_04_0818 + 28309950-28311344 31 1.3
02_01_0317 - 2128660-2128776,2129281-2129364,2129463-2129543,213... 31 1.3
04_04_0816 + 28288407-28289801 29 3.0
07_03_1569 - 27792739-27794175 29 5.2
07_01_0715 + 5463705-5463853,5463934-5464287,5464849-5464932,546... 28 6.9
07_01_0712 - 5381641-5381667,5382107-5382261,5382917-5383006,538... 28 6.9
06_01_0394 - 2835438-2835896,2836664-2836913,2837197-2837669,283... 28 6.9
04_03_0905 - 20722090-20722207,20722314-20722395,20722698-207228... 28 9.2
01_01_0765 + 5917163-5918212 28 9.2
>01_06_0638 -
30768546-30768779,30768908-30769017,30769301-30769490,
30769842-30769914,30770007-30770063,30770147-30770211,
30770278-30770488,30770568-30770650,30771123-30771158,
30771611-30771713,30771813-30771899,30772210-30772403
Length = 480
Score = 87.8 bits (208), Expect(2) = 3e-37
Identities = 50/130 (38%), Positives = 71/130 (54%)
Frame = +2
Query: 236 LHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYA 415
+H GE D+R +Y AIS+A + N L +I CQTYEGG AG P EAHGGY
Sbjct: 222 MHDGGEIDVRASYTAISVASLVNILDGELAKGVGNYITRCQTYEGGIAGEPYAEAHGGYT 281
Query: 416 FCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQGAAFPIIS 595
FCG+A++ LLN D+ SL+ VN I F ++ L D + QGAA +
Sbjct: 282 FCGLATMILLNEVDKLDLASLI---VN---AIPVFFFLASSTLSDKLLVYDQGAALALTQ 335
Query: 596 AILSKDNKEL 625
+++ +++L
Sbjct: 336 KLMTVVDEQL 345
Score = 85.8 bits (203), Expect(2) = 3e-37
Identities = 37/77 (48%), Positives = 54/77 (70%)
Frame = +2
Query: 2 NDMPDHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDR 181
+++PD + +V FL +CQ +DGGYGGGP Q PHL TTYAAVN L IG++ A S++R
Sbjct: 110 DEIPD-DVEDDIVDFLSRCQDKDGGYGGGPGQLPHLATTYAAVNTLVTIGSERALSSVNR 168
Query: 182 SSLQRFLWTVRDVDGSF 232
+L +F+ ++D G+F
Sbjct: 169 DNLYKFMLRMKDTSGAF 185
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/39 (66%), Positives = 30/39 (76%)
Frame = +2
Query: 638 LFNQSALQEYILICCQNRDGGLIDKPGKPRDIYHTCYGL 754
LF+ ALQ+YIL+C Q DGGL DKPGK RD YH+CY L
Sbjct: 388 LFHNIALQQYILLCAQVLDGGLRDKPGKNRDHYHSCYCL 426
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +2
Query: 14 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSL 190
D E V ++ +CQ +GG G P H G T+ + + ++ D +D +SL
Sbjct: 247 DGELAKGVGNYITRCQTYEGGIAGEPYAEAHGGYTFCGLATMILL---NEVDKLDLASL 302
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/58 (20%), Positives = 25/58 (43%)
Frame = +2
Query: 272 YCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLALL 445
Y I + + + + D +++ CQ +GG+ G PG H + + +L +
Sbjct: 100 YWIIHALALLDEIPDDVEDDIVDFLSRCQDKDGGYGGGPGQLPHLATTYAAVNTLVTI 157
>08_02_1226 +
25394106-25394168,25394243-25394396,25394548-25394664,
25395541-25395607,25395701-25395828,25396327-25396460,
25396552-25396650,25396780-25396902
Length = 294
Score = 119 bits (287), Expect = 2e-27
Identities = 75/241 (31%), Positives = 121/241 (50%), Gaps = 1/241 (0%)
Frame = +2
Query: 35 VVKFLDQCQH-EDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTV 211
V++++ C H E GG+GG H+ T +AV L + + D++D + ++ +
Sbjct: 60 VIEWIMSCYHPESGGFGGNVGHDAHVLYTLSAVQVLCLF---DRLDALDVDKVADYIAGL 116
Query: 212 RDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPG 391
++ DGSF+ GE D R +Y AI + + + K ++IVSC+ +GGF PG
Sbjct: 117 QNEDGSFSGDIWGEVDTRFSYIAICTLSLLHRLEKINVQKAVDYIVSCKNLDGGFGAMPG 176
Query: 392 MEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQ 571
+ FC + +LA+ D D L W RQ + EGG GR KL D CYS+W
Sbjct: 177 V-------FCCVGALAITGSLHHIDRDLLGWWLCERQCK-EGGLNGRPEKLADVCYSWW- 227
Query: 572 GAAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIYHTCYG 751
++S+++ D I+ + L ++IL C +GG+ D+P DIYHT +G
Sbjct: 228 -----VLSSLIMIDRVHWID-----KDKLAKFILNCQDKENGGISDRPDNAVDIYHTYFG 277
Query: 752 L 754
+
Sbjct: 278 V 278
Score = 52.8 bits (121), Expect = 3e-07
Identities = 48/176 (27%), Positives = 72/176 (40%), Gaps = 1/176 (0%)
Frame = +2
Query: 194 RFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYE-G 370
R++ TV SF + GAY ++ + + D+ EWI+SC E G
Sbjct: 14 RYIVTVEKRKDSFESLVMEHIRLNGAYWGLTTLDLLHKLRAVEADEVIEWIMSCYHPESG 73
Query: 371 GFAGCPGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVD 550
GF G G +AH Y + L L +R D+D + + Q +G F G VD
Sbjct: 74 GFGGNVGHDAHVLYTLSAVQVLCLFDRLDALDVDKVADYIAGLQNE-DGSFSGDIWGEVD 132
Query: 551 GCYSFWQGAAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPG 718
+S+ AI + +E + N +YI + C+N DGG PG
Sbjct: 133 TRFSY---------IAICTLSLLHRLEKI--NVQKAVDYI-VSCKNLDGGFGAMPG 176
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/72 (22%), Positives = 32/72 (44%)
Frame = +2
Query: 314 EALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSV 493
E +K +IV+ + + F A+ G+ +L LL++ + + D ++ W +
Sbjct: 6 ELAAEKHVRYIVTVEKRKDSFESLVMEHIRLNGAYWGLTTLDLLHKLRAVEADEVIEWIM 65
Query: 494 NRQMRIEGGFQG 529
+ GGF G
Sbjct: 66 SCYHPESGGFGG 77
>01_01_0336 +
2712412-2712576,2713663-2713738,2713840-2713898,
2714009-2714148,2714690-2714745,2714832-2714908,
2715007-2715075
Length = 213
Score = 79.0 bits (186), Expect = 4e-15
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +2
Query: 104 HLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVRDVDGSFA-LHKDGEQDIRGAYCA 280
HL +TY+A+ L I+G D A +ID L + ++ DGSF H E D+R YCA
Sbjct: 108 HLASTYSALAILKIVGYDLA--NIDNKVLLSSMRNLQQPDGSFMPTHIGAETDLRFVYCA 165
Query: 281 ISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAF 418
+I M +T +K ++I+SCQ+Y+GGF PG E+HG +F
Sbjct: 166 AAICSMLKDWTGMDKEKAKQYILSCQSYDGGFGLVPGSESHGTASF 211
>04_04_0818 + 28309950-28311344
Length = 464
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 179 RSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMT 301
R S QRF+W +RD D GE + R A +K T
Sbjct: 296 RGSKQRFIWVMRDADRGNIFTDTGEGETRHAKLLSEFSKQT 336
>02_01_0317 -
2128660-2128776,2129281-2129364,2129463-2129543,
2130230-2130407,2130530-2130673,2130780-2130826,
2131149-2131205,2131989-2132087,2132301-2132423,
2132514-2132636,2132859-2132972,2133612-2133800,
2134408-2134574,2134707-2134791,2134891-2135085,
2135162-2135251,2135418-2135603,2135885-2135959,
2136757-2136957
Length = 784
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +2
Query: 62 HEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVRDVDGSFALH 241
H G YGG P L T AL+ A S + ++R+L+ ++ DG + LH
Sbjct: 139 HWPGDYGGPMFLMPGLIITLYVSGALNT-----ALSSEHQKEIRRYLYNHQNEDGGWGLH 193
Query: 242 KDGEQDIRGA---YCAISIAKMTNTYTEALFDKTAEWIV 349
+G + G+ Y ++ + + +K +WI+
Sbjct: 194 IEGHSTMFGSALTYVSLRLLGEGPDSGDGAMEKGRKWIL 232
>04_04_0816 + 28288407-28289801
Length = 464
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 179 RSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMT 301
R S QRF+W +RD D GE + R A K T
Sbjct: 296 RGSKQRFIWVLRDADRGNIFAGSGESESRYAKLLSEFCKET 336
>07_03_1569 - 27792739-27794175
Length = 478
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 179 RSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCA 280
R S QRF+W +RD D + ++ E + GA A
Sbjct: 299 RGSGQRFIWALRDADRADMDTREAEAAVHGARLA 332
>07_01_0715 +
5463705-5463853,5463934-5464287,5464849-5464932,
5465170-5465270,5465603-5465665,5466198-5466287,
5466390-5466479,5467135-5467289,5467729-5467755
Length = 370
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/63 (26%), Positives = 25/63 (39%)
Frame = +2
Query: 281 ISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLALLNRTQL 460
++ T YTE L +K W+ AGC E H GY + +A + +T
Sbjct: 204 VTTGNHTYFYTEGLSNKARSWMADILDLSLR-AGCKRSEHHEGYPLQSSSLVAAITQTMF 262
Query: 461 CDI 469
I
Sbjct: 263 STI 265
>07_01_0712 -
5381641-5381667,5382107-5382261,5382917-5383006,
5383109-5383198,5383731-5383793,5384126-5384226,
5384464-5384547,5385109-5385462,5385543-5385691
Length = 370
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/63 (26%), Positives = 25/63 (39%)
Frame = +2
Query: 281 ISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLALLNRTQL 460
++ T YTE L +K W+ AGC E H GY + +A + +T
Sbjct: 204 VTTGNHTYFYTEGLSNKARSWMADILDLSLR-AGCKRSEHHEGYPLQSSSLVAAITQTMF 262
Query: 461 CDI 469
I
Sbjct: 263 STI 265
>06_01_0394 -
2835438-2835896,2836664-2836913,2837197-2837669,
2838941-2840608
Length = 949
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 62 HEDGGYGGGPRQYPHLGTTYAAVNA 136
+ED YGGG +PHL AV +
Sbjct: 168 YEDADYGGGAGVFPHLADALRAVGS 192
>04_03_0905 -
20722090-20722207,20722314-20722395,20722698-20722851,
20723026-20723089,20724282-20724404,20725326-20725452,
20725541-20726171
Length = 432
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = +2
Query: 83 GGPRQYPHLGTT--YAAVNALSIIGTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDGEQ 256
GGP H+G YA V + IG D + + S + W V V G L G +
Sbjct: 309 GGPWSVDHIGVCFFYAFVKKIEEIGADYKFAFVFGSCVSLQFWLVAAVLGYPRLRAHGGK 368
Query: 257 D 259
D
Sbjct: 369 D 369
>01_01_0765 + 5917163-5918212
Length = 349
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 447 FNRAKDAIPQNA*PPCASIPGQPAKPPSY 361
F R + P +A PP + P+ PPSY
Sbjct: 30 FRRHRSPTPPSADPPTPELTPSPSAPPSY 58
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,552,232
Number of Sequences: 37544
Number of extensions: 460879
Number of successful extensions: 1370
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1363
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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