Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3j04
         (754 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         26   1.4  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         26   1.4  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   3.3  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    25   3.3  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             24   4.4  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   7.7  
AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    23   7.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   7.7  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 422 HRMHSHHVLPYQDNQQSHPHMSDN*QSILP 333
           H+   HH LP+  + Q HP    + Q+  P
Sbjct: 95  HQHPHHHQLPHHPHHQHHPQQQPSPQTSPP 124


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 422 HRMHSHHVLPYQDNQQSHPHMSDN*QSILP 333
           H+   HH LP+  + Q HP    + Q+  P
Sbjct: 95  HQHPHHHQLPHHPHHQHHPQQQPSPQTSPP 124


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 281 ISIAKMTNTYTEALFDKTAEWIVSCQ 358
           IS+ K+ N   +  FD+T   +V C+
Sbjct: 355 ISVGKLVNKGAKVTFDETRGCVVECE 380


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 422 HRMHSHHVLPYQDNQQSHPHMSD 354
           H+M S +++PY  +   HP+  D
Sbjct: 339 HKMASMNIVPYHMSPYGHPYQFD 361


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 464 DIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSF 565
           D+  LL  S  +++ + GG +G     V GC  F
Sbjct: 197 DLCRLLPLSFEKEVTVRGGVKGYRFTTVPGCVCF 230


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = +2

Query: 2   NDMPDHETLSAVVKFLDQCQHED-GGYGGGPRQY 100
           ND    +   +   F D+ Q  D GGYGGG   Y
Sbjct: 31  NDTNGFDNYQSNNAFGDEYQSNDNGGYGGGDDGY 64


>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 626 IETVLFNQSALQEYILICCQNRDGGLIDKPGKPRD 730
           + T+L +Q   Q   L C    D      PG+P+D
Sbjct: 416 VNTMLTSQMLNQTTSLCCASPADSNPPGGPGRPKD 450


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 401 VLPYQDNQQSHPHMSDN*QSILP 333
           V P    QQ HPH  D   ++ P
Sbjct: 135 VRPLLPQQQQHPHQRDTGPALFP 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 850,653
Number of Sequences: 2352
Number of extensions: 19390
Number of successful extensions: 28
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)