Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3j04
(754 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L00635-1|AAA35854.1| 437|Homo sapiens farnesyl-protein transfer... 314 2e-85
BC020232-1|AAH20232.1| 437|Homo sapiens farnesyltransferase, CA... 314 2e-85
L10414-1|AAA86286.1| 387|Homo sapiens farnesyl-protein transfer... 312 1e-84
X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferas... 128 3e-29
CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein. 128 3e-29
BC020790-1|AAH20790.1| 331|Homo sapiens Rab geranylgeranyltrans... 128 3e-29
AL357314-5|CAI22393.1| 331|Homo sapiens Rab geranylgeranyltrans... 128 3e-29
U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferas... 127 4e-29
Y08201-1|CAA69383.1| 331|Homo sapiens rab geranylgeranyl transf... 125 2e-28
AB209023-1|BAD92260.1| 320|Homo sapiens Rab geranylgeranyltrans... 120 4e-27
L25441-1|AAA35888.1| 377|Homo sapiens geranylgeranyltransferase... 106 7e-23
AY780790-1|AAV98360.1| 300|Homo sapiens geranylgeranyltransfera... 44 8e-04
AL357314-4|CAI22392.1| 152|Homo sapiens Rab geranylgeranyltrans... 38 0.029
>L00635-1|AAA35854.1| 437|Homo sapiens farnesyl-protein transferase
beta-subunit protein.
Length = 437
Score = 314 bits (772), Expect = 2e-85
Identities = 140/242 (57%), Positives = 173/242 (71%), Gaps = 2/242 (0%)
Frame = +2
Query: 35 VVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVR 214
V +FL+ CQ +GG+GGGP QYPHL TYAAVNAL IIGT+EAYD I+R L ++L++++
Sbjct: 126 VCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLK 185
Query: 215 DVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGM 394
DGSF +H GE D+R AYCA S+A +TN T LF+ TAEWI CQ +EGG G PGM
Sbjct: 186 QPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGM 245
Query: 395 EAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQG 574
EAHGGY FCG+A+L +L R + ++ SLL+W +RQMR EGGFQGR NKLVDGCYSFWQ
Sbjct: 246 EAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQA 305
Query: 575 AAFPIISAILSKDNKELIETV--LFNQSALQEYILICCQNRDGGLIDKPGKPRDIYHTCY 748
P++ L + +F+Q ALQEYIL+CCQ GGL+DKPGK RD YHTCY
Sbjct: 306 GLLPLLHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCY 365
Query: 749 GL 754
L
Sbjct: 366 CL 367
Score = 31.1 bits (67), Expect = 4.5
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 20 ETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSII 148
+ +++ +CQ+ +GG GG P H G T+ + AL I+
Sbjct: 220 DLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVIL 262
>BC020232-1|AAH20232.1| 437|Homo sapiens farnesyltransferase, CAAX
box, beta protein.
Length = 437
Score = 314 bits (772), Expect = 2e-85
Identities = 140/242 (57%), Positives = 173/242 (71%), Gaps = 2/242 (0%)
Frame = +2
Query: 35 VVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVR 214
V +FL+ CQ +GG+GGGP QYPHL TYAAVNAL IIGT+EAYD I+R L ++L++++
Sbjct: 126 VCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLK 185
Query: 215 DVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGM 394
DGSF +H GE D+R AYCA S+A +TN T LF+ TAEWI CQ +EGG G PGM
Sbjct: 186 QPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGM 245
Query: 395 EAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQG 574
EAHGGY FCG+A+L +L R + ++ SLL+W +RQMR EGGFQGR NKLVDGCYSFWQ
Sbjct: 246 EAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQA 305
Query: 575 AAFPIISAILSKDNKELIETV--LFNQSALQEYILICCQNRDGGLIDKPGKPRDIYHTCY 748
P++ L + +F+Q ALQEYIL+CCQ GGL+DKPGK RD YHTCY
Sbjct: 306 GLLPLLHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCY 365
Query: 749 GL 754
L
Sbjct: 366 CL 367
Score = 31.1 bits (67), Expect = 4.5
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 20 ETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSII 148
+ +++ +CQ+ +GG GG P H G T+ + AL I+
Sbjct: 220 DLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVIL 262
>L10414-1|AAA86286.1| 387|Homo sapiens farnesyl-protein transferase
beta-subunit protein.
Length = 387
Score = 312 bits (765), Expect = 1e-84
Identities = 139/242 (57%), Positives = 172/242 (71%), Gaps = 2/242 (0%)
Frame = +2
Query: 35 VVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVR 214
V +FL+ CQ +GG+GGGP QYPHL TYAAVNAL IIGT+EAYD I+R L ++L++++
Sbjct: 76 VCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLK 135
Query: 215 DVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGM 394
DGSF +H GE D+R AYCA S+A +TN T LF+ TAEWI CQ +EGG G PGM
Sbjct: 136 QPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGM 195
Query: 395 EAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQG 574
EAHGGY FCG+A+L +L R + ++ SLL+W +RQM EGGFQGR NKLVDGCYSFWQ
Sbjct: 196 EAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMLFEGGFQGRCNKLVDGCYSFWQA 255
Query: 575 AAFPIISAILSKDNKELIETV--LFNQSALQEYILICCQNRDGGLIDKPGKPRDIYHTCY 748
P++ L + +F+Q ALQEYIL+CCQ GGL+DKPGK RD YHTCY
Sbjct: 256 GLLPLLHRALHAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCY 315
Query: 749 GL 754
L
Sbjct: 316 CL 317
Score = 31.1 bits (67), Expect = 4.5
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 20 ETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSII 148
+ +++ +CQ+ +GG GG P H G T+ + AL I+
Sbjct: 170 DLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVIL 212
>X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferase
II protein.
Length = 331
Score = 128 bits (308), Expect = 3e-29
Identities = 75/240 (31%), Positives = 119/240 (49%)
Frame = +2
Query: 35 VVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVR 214
++ F+ CQHE GG PHL T +AV L++ ++ + ID + + ++ ++
Sbjct: 71 ILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY---DSINVIDVNKVVEYVKGLQ 127
Query: 215 DVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGM 394
DGSFA GE D R ++CA++ + +K E+++SC ++GGF PG
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGS 187
Query: 395 EAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQG 574
E+H G +C LA+ ++ + D L W RQ+ GG GR KL D CYS+W
Sbjct: 188 ESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLP-SGGLNGRPEKLPDVCYSWWVL 246
Query: 575 AAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIYHTCYGL 754
A+ II + D ++ L+ +IL C GG D+PG D +HT +G+
Sbjct: 247 ASLKIIGRLHWIDREK-----------LRNFILACQDEETGGFADRPGDMVDPFHTLFGI 295
Score = 57.6 bits (133), Expect = 4e-08
Identities = 43/189 (22%), Positives = 77/189 (40%)
Frame = +2
Query: 26 LSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLW 205
++ VV+++ Q EDG + G ++ AV L+++G D+I+ F+
Sbjct: 116 VNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGK---LDAINVEKAIEFVL 172
Query: 206 TVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGC 385
+ + DG F E YC +T+ + D W+ Q GG G
Sbjct: 173 SCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGR 232
Query: 386 PGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSF 565
P Y++ +ASL ++ R D + L + + Q GGF R +VD ++
Sbjct: 233 PEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTL 292
Query: 566 WQGAAFPII 592
+ A ++
Sbjct: 293 FGIAGLSLL 301
Score = 44.8 bits (101), Expect = 3e-04
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 1/150 (0%)
Frame = +2
Query: 14 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQ 193
D + ++F+ C + DGG+G P H G Y L+I T + + ++ L
Sbjct: 160 DAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAI--TSQLH-QVNSDLLG 216
Query: 194 RFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYE-G 370
+L + G + D+ ++ ++ K+ +K +I++CQ E G
Sbjct: 217 WWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETG 276
Query: 371 GFAGCPGMEAHGGYAFCGIASLALLNRTQL 460
GFA PG + GIA L+LL Q+
Sbjct: 277 GFADRPGDMVDPFHTLFGIAGLSLLGEEQI 306
Score = 37.5 bits (83), Expect = 0.051
Identities = 33/151 (21%), Positives = 62/151 (41%)
Frame = +2
Query: 266 GAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLALL 445
G Y +++ + ++ +I SCQ GG + G + H Y + L L
Sbjct: 49 GIYWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY 108
Query: 446 NRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQGAAFPIISAILSKDNKEL 625
+ + D++ ++ + V + +G F G +D +SF A ++ + + + ++
Sbjct: 109 DSINVIDVNKVVEY-VKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKA 167
Query: 626 IETVLFNQSALQEYILICCQNRDGGLIDKPG 718
IE VL C N DGG +PG
Sbjct: 168 IEFVL------------SCMNFDGGFGCRPG 186
>CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein.
Length = 331
Score = 128 bits (308), Expect = 3e-29
Identities = 75/240 (31%), Positives = 119/240 (49%)
Frame = +2
Query: 35 VVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVR 214
++ F+ CQHE GG PHL T +AV L++ ++ + ID + + ++ ++
Sbjct: 71 ILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY---DSINVIDVNKVVEYVKGLQ 127
Query: 215 DVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGM 394
DGSFA GE D R ++CA++ + +K E+++SC ++GGF PG
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGS 187
Query: 395 EAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQG 574
E+H G +C LA+ ++ + D L W RQ+ GG GR KL D CYS+W
Sbjct: 188 ESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLP-SGGLNGRPEKLPDVCYSWWVL 246
Query: 575 AAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIYHTCYGL 754
A+ II + D ++ L+ +IL C GG D+PG D +HT +G+
Sbjct: 247 ASLKIIGRLHWIDREK-----------LRNFILACQDEETGGFADRPGDMVDPFHTLFGI 295
Score = 57.6 bits (133), Expect = 4e-08
Identities = 43/189 (22%), Positives = 77/189 (40%)
Frame = +2
Query: 26 LSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLW 205
++ VV+++ Q EDG + G ++ AV L+++G D+I+ F+
Sbjct: 116 VNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGK---LDAINVEKAIEFVL 172
Query: 206 TVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGC 385
+ + DG F E YC +T+ + D W+ Q GG G
Sbjct: 173 SCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGR 232
Query: 386 PGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSF 565
P Y++ +ASL ++ R D + L + + Q GGF R +VD ++
Sbjct: 233 PEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTL 292
Query: 566 WQGAAFPII 592
+ A ++
Sbjct: 293 FGIAGLSLL 301
Score = 44.8 bits (101), Expect = 3e-04
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 1/150 (0%)
Frame = +2
Query: 14 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQ 193
D + ++F+ C + DGG+G P H G Y L+I T + + ++ L
Sbjct: 160 DAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAI--TSQLH-QVNSDLLG 216
Query: 194 RFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYE-G 370
+L + G + D+ ++ ++ K+ +K +I++CQ E G
Sbjct: 217 WWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETG 276
Query: 371 GFAGCPGMEAHGGYAFCGIASLALLNRTQL 460
GFA PG + GIA L+LL Q+
Sbjct: 277 GFADRPGDMVDPFHTLFGIAGLSLLGEEQI 306
Score = 37.5 bits (83), Expect = 0.051
Identities = 33/151 (21%), Positives = 62/151 (41%)
Frame = +2
Query: 266 GAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLALL 445
G Y +++ + ++ +I SCQ GG + G + H Y + L L
Sbjct: 49 GIYWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY 108
Query: 446 NRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQGAAFPIISAILSKDNKEL 625
+ + D++ ++ + V + +G F G +D +SF A ++ + + + ++
Sbjct: 109 DSINVIDVNKVVEY-VKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKA 167
Query: 626 IETVLFNQSALQEYILICCQNRDGGLIDKPG 718
IE VL C N DGG +PG
Sbjct: 168 IEFVL------------SCMNFDGGFGCRPG 186
>BC020790-1|AAH20790.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 128 bits (308), Expect = 3e-29
Identities = 75/240 (31%), Positives = 119/240 (49%)
Frame = +2
Query: 35 VVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVR 214
++ F+ CQHE GG PHL T +AV L++ ++ + ID + + ++ ++
Sbjct: 71 ILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY---DSINVIDVNKVVEYVKGLQ 127
Query: 215 DVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGM 394
DGSFA GE D R ++CA++ + +K E+++SC ++GGF PG
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGS 187
Query: 395 EAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQG 574
E+H G +C LA+ ++ + D L W RQ+ GG GR KL D CYS+W
Sbjct: 188 ESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLP-SGGLNGRPEKLPDVCYSWWVL 246
Query: 575 AAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIYHTCYGL 754
A+ II + D ++ L+ +IL C GG D+PG D +HT +G+
Sbjct: 247 ASLKIIGRLHWIDREK-----------LRNFILACQDEETGGFADRPGDMVDPFHTLFGI 295
Score = 57.6 bits (133), Expect = 4e-08
Identities = 43/189 (22%), Positives = 77/189 (40%)
Frame = +2
Query: 26 LSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLW 205
++ VV+++ Q EDG + G ++ AV L+++G D+I+ F+
Sbjct: 116 VNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGK---LDAINVEKAIEFVL 172
Query: 206 TVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGC 385
+ + DG F E YC +T+ + D W+ Q GG G
Sbjct: 173 SCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGR 232
Query: 386 PGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSF 565
P Y++ +ASL ++ R D + L + + Q GGF R +VD ++
Sbjct: 233 PEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTL 292
Query: 566 WQGAAFPII 592
+ A ++
Sbjct: 293 FGIAGLSLL 301
Score = 44.8 bits (101), Expect = 3e-04
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 1/150 (0%)
Frame = +2
Query: 14 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQ 193
D + ++F+ C + DGG+G P H G Y L+I T + + ++ L
Sbjct: 160 DAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAI--TSQLH-QVNSDLLG 216
Query: 194 RFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYE-G 370
+L + G + D+ ++ ++ K+ +K +I++CQ E G
Sbjct: 217 WWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETG 276
Query: 371 GFAGCPGMEAHGGYAFCGIASLALLNRTQL 460
GFA PG + GIA L+LL Q+
Sbjct: 277 GFADRPGDMVDPFHTLFGIAGLSLLGEEQI 306
Score = 37.5 bits (83), Expect = 0.051
Identities = 33/151 (21%), Positives = 62/151 (41%)
Frame = +2
Query: 266 GAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLALL 445
G Y +++ + ++ +I SCQ GG + G + H Y + L L
Sbjct: 49 GIYWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY 108
Query: 446 NRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQGAAFPIISAILSKDNKEL 625
+ + D++ ++ + V + +G F G +D +SF A ++ + + + ++
Sbjct: 109 DSINVIDVNKVVEY-VKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKA 167
Query: 626 IETVLFNQSALQEYILICCQNRDGGLIDKPG 718
IE VL C N DGG +PG
Sbjct: 168 IEFVL------------SCMNFDGGFGCRPG 186
>AL357314-5|CAI22393.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 128 bits (308), Expect = 3e-29
Identities = 75/240 (31%), Positives = 119/240 (49%)
Frame = +2
Query: 35 VVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVR 214
++ F+ CQHE GG PHL T +AV L++ ++ + ID + + ++ ++
Sbjct: 71 ILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY---DSINVIDVNKVVEYVKGLQ 127
Query: 215 DVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGM 394
DGSFA GE D R ++CA++ + +K E+++SC ++GGF PG
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGS 187
Query: 395 EAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQG 574
E+H G +C LA+ ++ + D L W RQ+ GG GR KL D CYS+W
Sbjct: 188 ESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLP-SGGLNGRPEKLPDVCYSWWVL 246
Query: 575 AAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIYHTCYGL 754
A+ II + D ++ L+ +IL C GG D+PG D +HT +G+
Sbjct: 247 ASLKIIGRLHWIDREK-----------LRNFILACQDEETGGFADRPGDMVDPFHTLFGI 295
Score = 57.6 bits (133), Expect = 4e-08
Identities = 43/189 (22%), Positives = 77/189 (40%)
Frame = +2
Query: 26 LSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLW 205
++ VV+++ Q EDG + G ++ AV L+++G D+I+ F+
Sbjct: 116 VNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGK---LDAINVEKAIEFVL 172
Query: 206 TVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGC 385
+ + DG F E YC +T+ + D W+ Q GG G
Sbjct: 173 SCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGR 232
Query: 386 PGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSF 565
P Y++ +ASL ++ R D + L + + Q GGF R +VD ++
Sbjct: 233 PEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTL 292
Query: 566 WQGAAFPII 592
+ A ++
Sbjct: 293 FGIAGLSLL 301
Score = 44.8 bits (101), Expect = 3e-04
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 1/150 (0%)
Frame = +2
Query: 14 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQ 193
D + ++F+ C + DGG+G P H G Y L+I T + + ++ L
Sbjct: 160 DAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAI--TSQLH-QVNSDLLG 216
Query: 194 RFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYE-G 370
+L + G + D+ ++ ++ K+ +K +I++CQ E G
Sbjct: 217 WWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETG 276
Query: 371 GFAGCPGMEAHGGYAFCGIASLALLNRTQL 460
GFA PG + GIA L+LL Q+
Sbjct: 277 GFADRPGDMVDPFHTLFGIAGLSLLGEEQI 306
Score = 37.5 bits (83), Expect = 0.051
Identities = 33/151 (21%), Positives = 62/151 (41%)
Frame = +2
Query: 266 GAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLALL 445
G Y +++ + ++ +I SCQ GG + G + H Y + L L
Sbjct: 49 GIYWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY 108
Query: 446 NRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQGAAFPIISAILSKDNKEL 625
+ + D++ ++ + V + +G F G +D +SF A ++ + + + ++
Sbjct: 109 DSINVIDVNKVVEY-VKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKA 167
Query: 626 IETVLFNQSALQEYILICCQNRDGGLIDKPG 718
IE VL C N DGG +PG
Sbjct: 168 IEFVL------------SCMNFDGGFGCRPG 186
>U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferase
type II beta-subunit protein.
Length = 331
Score = 127 bits (307), Expect = 4e-29
Identities = 75/240 (31%), Positives = 119/240 (49%)
Frame = +2
Query: 35 VVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVR 214
++ F+ CQHE GG PHL T +AV L++ ++ + ID + + ++ ++
Sbjct: 71 ILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY---DSINVIDVNKVVEYVKGLQ 127
Query: 215 DVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGM 394
DGSFA GE D R ++CA++ + +K E+++SC ++GGF PG
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATFALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGS 187
Query: 395 EAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQG 574
E+H G +C LA+ ++ + D L W RQ+ GG GR KL D CYS+W
Sbjct: 188 ESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLP-SGGLNGRPEKLPDVCYSWWVL 246
Query: 575 AAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIYHTCYGL 754
A+ II + D ++ L+ +IL C GG D+PG D +HT +G+
Sbjct: 247 ASLKIIGRLHWIDREK-----------LRNFILACQDEETGGFADRPGDMVDPFHTLFGI 295
Score = 56.0 bits (129), Expect = 1e-07
Identities = 42/189 (22%), Positives = 76/189 (40%)
Frame = +2
Query: 26 LSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLW 205
++ VV+++ Q EDG + G ++ AV +++G D+I+ F+
Sbjct: 116 VNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATFALLGK---LDAINVEKAIEFVL 172
Query: 206 TVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGC 385
+ + DG F E YC +T+ + D W+ Q GG G
Sbjct: 173 SCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGR 232
Query: 386 PGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSF 565
P Y++ +ASL ++ R D + L + + Q GGF R +VD ++
Sbjct: 233 PEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTL 292
Query: 566 WQGAAFPII 592
+ A ++
Sbjct: 293 FGIAGLSLL 301
Score = 44.8 bits (101), Expect = 3e-04
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 1/150 (0%)
Frame = +2
Query: 14 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQ 193
D + ++F+ C + DGG+G P H G Y L+I T + + ++ L
Sbjct: 160 DAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAI--TSQLH-QVNSDLLG 216
Query: 194 RFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYE-G 370
+L + G + D+ ++ ++ K+ +K +I++CQ E G
Sbjct: 217 WWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETG 276
Query: 371 GFAGCPGMEAHGGYAFCGIASLALLNRTQL 460
GFA PG + GIA L+LL Q+
Sbjct: 277 GFADRPGDMVDPFHTLFGIAGLSLLGEEQI 306
Score = 39.9 bits (89), Expect = 0.010
Identities = 34/151 (22%), Positives = 63/151 (41%)
Frame = +2
Query: 266 GAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLALL 445
G Y +++ + ++ +I SCQ GG + G + H Y + L L
Sbjct: 49 GIYWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY 108
Query: 446 NRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQGAAFPIISAILSKDNKEL 625
+ + D++ ++ + V + +G F G +D +SF A F ++ + + + ++
Sbjct: 109 DSINVIDVNKVVEY-VKGLQKEDGSFAGDIWGEIDTRFSFCAVATFALLGKLDAINVEKA 167
Query: 626 IETVLFNQSALQEYILICCQNRDGGLIDKPG 718
IE VL C N DGG +PG
Sbjct: 168 IEFVL------------SCMNFDGGFGCRPG 186
>Y08201-1|CAA69383.1| 331|Homo sapiens rab geranylgeranyl
transferase protein.
Length = 331
Score = 125 bits (301), Expect = 2e-28
Identities = 75/240 (31%), Positives = 117/240 (48%)
Frame = +2
Query: 35 VVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVR 214
++ F+ CQHE GG PHL T +AV L++ ++ + ID + + ++ ++
Sbjct: 71 ILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY---DSINVIDVNKVVEYVKGLQ 127
Query: 215 DVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGM 394
DGSFA GE D R ++CA++ + +K E+++SC +GGF PG
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNSDGGFGCRPGS 187
Query: 395 EAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQG 574
E+H G +C LA+ ++ D L W RQ+ GG GR KL D CYS+W
Sbjct: 188 ESHAGQIYCCTGFLAITSQLHQVTSDLLGWWLCERQLP-SGGLNGRPEKLPDVCYSWWVL 246
Query: 575 AAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIYHTCYGL 754
A+ II + D ++ L+ +IL C GG D+PG D +HT +G+
Sbjct: 247 ASLKIIGRLHWIDREK-----------LRNFILACQDEETGGFADRPGDMVDPFHTLFGI 295
Score = 58.0 bits (134), Expect = 3e-08
Identities = 43/189 (22%), Positives = 77/189 (40%)
Frame = +2
Query: 26 LSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLW 205
++ VV+++ Q EDG + G ++ AV L+++G D+I+ F+
Sbjct: 116 VNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGK---LDAINVEKAIEFVL 172
Query: 206 TVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGC 385
+ + DG F E YC +T+ + D W+ Q GG G
Sbjct: 173 SCMNSDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVTSDLLGWWLCERQLPSGGLNGR 232
Query: 386 PGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSF 565
P Y++ +ASL ++ R D + L + + Q GGF R +VD ++
Sbjct: 233 PEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTL 292
Query: 566 WQGAAFPII 592
+ A ++
Sbjct: 293 FGIAGLSLL 301
Score = 45.2 bits (102), Expect = 3e-04
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 1/150 (0%)
Frame = +2
Query: 14 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQ 193
D + ++F+ C + DGG+G P H G Y L+I T + + + L
Sbjct: 160 DAINVEKAIEFVLSCMNSDGGFGCRPGSESHAGQIYCCTGFLAI--TSQLH-QVTSDLLG 216
Query: 194 RFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYE-G 370
+L + G + D+ ++ ++ K+ +K +I++CQ E G
Sbjct: 217 WWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETG 276
Query: 371 GFAGCPGMEAHGGYAFCGIASLALLNRTQL 460
GFA PG + GIA L+LL Q+
Sbjct: 277 GFADRPGDMVDPFHTLFGIAGLSLLGEEQI 306
Score = 38.3 bits (85), Expect = 0.029
Identities = 33/151 (21%), Positives = 62/151 (41%)
Frame = +2
Query: 266 GAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLALL 445
G Y +++ + ++ +I SCQ GG + G + H Y + L L
Sbjct: 49 GIYWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY 108
Query: 446 NRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQGAAFPIISAILSKDNKEL 625
+ + D++ ++ + V + +G F G +D +SF A ++ + + + ++
Sbjct: 109 DSINVIDVNKVVEY-VKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKA 167
Query: 626 IETVLFNQSALQEYILICCQNRDGGLIDKPG 718
IE VL C N DGG +PG
Sbjct: 168 IEFVL------------SCMNSDGGFGCRPG 186
>AB209023-1|BAD92260.1| 320|Homo sapiens Rab
geranylgeranyltransferase, beta subunit variant protein.
Length = 320
Score = 120 bits (290), Expect = 4e-27
Identities = 73/234 (31%), Positives = 114/234 (48%)
Frame = +2
Query: 35 VVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVR 214
++ F+ CQHE GG PHL T +AV L++ ++ + ID + + ++ ++
Sbjct: 71 ILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY---DSINVIDVNKVVEYVKGLQ 127
Query: 215 DVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGM 394
DGSFA GE D R ++CA++ + +K E+++SC ++GGF PG
Sbjct: 128 KEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGS 187
Query: 395 EAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQG 574
E+H G +C LA+ ++ + D L W RQ+ GG GR KL D CYS+W
Sbjct: 188 ESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLP-SGGLNGRPEKLPDVCYSWWVL 246
Query: 575 AAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIY 736
A+ II + D ++ L+ +IL C GG D+PG IY
Sbjct: 247 ASLKIIGRLHWIDREK-----------LRNFILACQDEETGGFADRPGDMHFIY 289
Score = 37.5 bits (83), Expect = 0.051
Identities = 33/151 (21%), Positives = 62/151 (41%)
Frame = +2
Query: 266 GAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLALL 445
G Y +++ + ++ +I SCQ GG + G + H Y + L L
Sbjct: 49 GIYWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY 108
Query: 446 NRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQGAAFPIISAILSKDNKEL 625
+ + D++ ++ + V + +G F G +D +SF A ++ + + + ++
Sbjct: 109 DSINVIDVNKVVEY-VKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKA 167
Query: 626 IETVLFNQSALQEYILICCQNRDGGLIDKPG 718
IE VL C N DGG +PG
Sbjct: 168 IEFVL------------SCMNFDGGFGCRPG 186
Score = 35.9 bits (79), Expect = 0.16
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Frame = +2
Query: 14 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQ 193
D + ++F+ C + DGG+G P H G Y L+I T + + ++ L
Sbjct: 160 DAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAI--TSQLH-QVNSDLLG 216
Query: 194 RFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYE-G 370
+L + G + D+ ++ ++ K+ +K +I++CQ E G
Sbjct: 217 WWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQDEETG 276
Query: 371 GFAGCPG 391
GFA PG
Sbjct: 277 GFADRPG 283
>L25441-1|AAA35888.1| 377|Homo sapiens geranylgeranyltransferase
type I beta-subunit protein.
Length = 377
Score = 106 bits (255), Expect = 7e-23
Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 5/227 (2%)
Frame = +2
Query: 89 PRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDG-EQDIR 265
P H+ TY ++ L I+G D +++ + L ++ DGSF +G E D+R
Sbjct: 116 PYDSGHIAMTYTGLSCLVILGDD--LSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMR 173
Query: 266 GAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLALL 445
YCA I M N ++ K +I +Y+ G A G+E+HGG FCGIASL L+
Sbjct: 174 FVYCASCICYMLNNWSGMDMKKAITYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLM 233
Query: 446 NRTQLC----DIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQGAAFPIISAILSKD 613
+ + +++ + RW + RQ + G+ GR NK VD CYSFW GA ++
Sbjct: 234 GKLEEVFSEKELNRIKRWCIMRQ---QNGYHGRPNKPVDTCYSFWVGATLKLL------- 283
Query: 614 NKELIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIYHTCYGL 754
++ + F ++ + YIL GG P D H +G+
Sbjct: 284 --KIFQYTNFEKN--RNYILSTQDRLVGGFAKWPDSHPDALHAYFGI 326
Score = 46.8 bits (106), Expect = 8e-05
Identities = 32/164 (19%), Positives = 68/164 (41%), Gaps = 2/164 (1%)
Frame = +2
Query: 26 LSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIG-TDEAYDSIDRSSLQRFL 202
+ + ++ + D G G H G+T+ + +L ++G +E + + + ++R
Sbjct: 193 MKKAITYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNRIKR-- 250
Query: 203 WTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQ-TYEGGFA 379
W + + + D ++ + K+ + F+K +I+S Q GGFA
Sbjct: 251 WCIMRQQNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTNFEKNRNYILSTQDRLVGGFA 310
Query: 380 GCPGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRI 511
P +A+ GI L+L+ + +C + L S R+
Sbjct: 311 KWPDSHPDALHAYFGICGLSLMEESGICKVHPALNVSTRTSERL 354
>AY780790-1|AAV98360.1| 300|Homo sapiens geranylgeranyltransferase
type I beta subunit protein.
Length = 300
Score = 43.6 bits (98), Expect = 8e-04
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 23/164 (14%)
Frame = +2
Query: 89 PRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDG-EQDIR 265
P H+ T ++ L I+G D +++ + L ++ DGSF +G E D+R
Sbjct: 116 PYDSGHIAMTCTGLSCLVILGDD--LSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMR 173
Query: 266 GAYCAISIAKMTNTYT-----EAL----------------FDKTAEWIVSCQ-TYEGGFA 379
YCA I M N ++ +A+ F+K +I+S Q GGFA
Sbjct: 174 FVYCASCICYMLNNWSGMDMKKAITYIRRSMLLKIFQYTNFEKNRNYILSTQDRLVGGFA 233
Query: 380 GCPGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRI 511
P +A+ GI L+L+ + +C + L S R+
Sbjct: 234 KWPDSHPDALHAYFGICGLSLMEESGICKVHPALNVSTRTSERL 277
>AL357314-4|CAI22392.1| 152|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 152
Score = 38.3 bits (85), Expect = 0.029
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 35 VVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVR 214
++ F+ CQHE GG PHL T +AV L++ ++ + ID + + ++ ++
Sbjct: 71 ILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLY---DSINVIDVNKVVEYVKGLQ 127
Query: 215 DVDGSFA 235
DGSFA
Sbjct: 128 KEDGSFA 134
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,084,405
Number of Sequences: 237096
Number of extensions: 2748901
Number of successful extensions: 5652
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5585
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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