Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3j04
(754 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051869-1|AAK93293.1| 419|Drosophila melanogaster LD36454p pro... 343 1e-94
AE014297-2201|AAF55310.1| 419|Drosophila melanogaster CG17565-P... 343 1e-94
AY060784-1|AAL28332.1| 347|Drosophila melanogaster GH25366p pro... 130 2e-30
AF133269-1|AAD33042.1| 347|Drosophila melanogaster geranylgeran... 130 2e-30
AE014134-506|AAF51183.1| 347|Drosophila melanogaster CG18627-PA... 130 2e-30
U43588-1|AAC46972.1| 395|Drosophila melanogaster geranylgeranyl... 106 3e-23
AY119246-1|AAM51106.1| 395|Drosophila melanogaster SD20823p pro... 106 3e-23
AE014134-811|AAF52177.1| 395|Drosophila melanogaster CG3469-PA ... 106 3e-23
U43587-1|AAC46971.1| 395|Drosophila melanogaster geranylgeranyl... 106 4e-23
BT021296-1|AAX33444.1| 1288|Drosophila melanogaster RE26350p pro... 31 2.2
AE014297-1888|AAF55090.2| 1288|Drosophila melanogaster CG33967-P... 31 2.2
BT030131-1|ABN49270.1| 1374|Drosophila melanogaster IP15972p pro... 29 9.0
AY118512-1|AAM49881.1| 911|Drosophila melanogaster LD14119p pro... 29 9.0
AE014134-2505|AAN10878.2| 1373|Drosophila melanogaster CG3479-PB... 29 9.0
AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA... 29 9.0
>AY051869-1|AAK93293.1| 419|Drosophila melanogaster LD36454p
protein.
Length = 419
Score = 343 bits (844), Expect = 1e-94
Identities = 157/250 (62%), Positives = 188/250 (75%), Gaps = 3/250 (1%)
Frame = +2
Query: 14 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQ 193
D +TL+ VV+FL C+ GG+GGGP QY HL TYAAVN+L IIG+++AY +IDR +L
Sbjct: 106 DDQTLNHVVQFLSNCRSPTGGFGGGPGQYAHLAPTYAAVNSLCIIGSEQAYRAIDRPTLV 165
Query: 194 RFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNT---YTEALFDKTAEWIVSCQTY 364
+FL++VRD DGSF LH DGE D+RGAYCAIS AK+ N + LF T +WI CQTY
Sbjct: 166 QFLFSVRDSDGSFRLHVDGETDVRGAYCAISCAKLLNLPEPVIKELFAGTGDWIAQCQTY 225
Query: 365 EGGFAGCPGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKL 544
EGGF G PG+EAHGGY FCGIA LALLN CD +LL+W++ RQM EGGFQGRTNKL
Sbjct: 226 EGGFGGAPGLEAHGGYTFCGIAGLALLNEADKCDRQALLKWTLRRQMTYEGGFQGRTNKL 285
Query: 545 VDGCYSFWQGAAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPGKP 724
VDGCYSFW GA PI A LS +K++ E LF+ ALQEYIL+CCQ + GGLIDKPGKP
Sbjct: 286 VDGCYSFWVGATIPITQATLSGVDKQM-EHTLFDVEALQEYILLCCQKQSGGLIDKPGKP 344
Query: 725 RDIYHTCYGL 754
+D+YHTCY L
Sbjct: 345 QDLYHTCYTL 354
Score = 32.3 bits (70), Expect = 0.73
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 272 YCAISIAKMTN-TYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLALLN 448
Y + A++ + + + + +++ +C++ GGF G PG AH + + SL ++
Sbjct: 92 YWILQAAQLLSFNFDDQTLNHVVQFLSNCRSPTGGFGGGPGQYAHLAPTYAAVNSLCIIG 151
Query: 449 RTQ 457
Q
Sbjct: 152 SEQ 154
>AE014297-2201|AAF55310.1| 419|Drosophila melanogaster CG17565-PA
protein.
Length = 419
Score = 343 bits (844), Expect = 1e-94
Identities = 157/250 (62%), Positives = 188/250 (75%), Gaps = 3/250 (1%)
Frame = +2
Query: 14 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQ 193
D +TL+ VV+FL C+ GG+GGGP QY HL TYAAVN+L IIG+++AY +IDR +L
Sbjct: 106 DDQTLNHVVQFLSNCRSPTGGFGGGPGQYAHLAPTYAAVNSLCIIGSEQAYRAIDRPTLV 165
Query: 194 RFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNT---YTEALFDKTAEWIVSCQTY 364
+FL++VRD DGSF LH DGE D+RGAYCAIS AK+ N + LF T +WI CQTY
Sbjct: 166 QFLFSVRDSDGSFRLHVDGETDVRGAYCAISCAKLLNLPEPVIKELFAGTGDWIAQCQTY 225
Query: 365 EGGFAGCPGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKL 544
EGGF G PG+EAHGGY FCGIA LALLN CD +LL+W++ RQM EGGFQGRTNKL
Sbjct: 226 EGGFGGAPGLEAHGGYTFCGIAGLALLNEADKCDRQALLKWTLRRQMTYEGGFQGRTNKL 285
Query: 545 VDGCYSFWQGAAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPGKP 724
VDGCYSFW GA PI A LS +K++ E LF+ ALQEYIL+CCQ + GGLIDKPGKP
Sbjct: 286 VDGCYSFWVGATIPITQATLSGVDKQM-EHTLFDVEALQEYILLCCQKQSGGLIDKPGKP 344
Query: 725 RDIYHTCYGL 754
+D+YHTCY L
Sbjct: 345 QDLYHTCYTL 354
Score = 32.3 bits (70), Expect = 0.73
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 272 YCAISIAKMTN-TYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLALLN 448
Y + A++ + + + + +++ +C++ GGF G PG AH + + SL ++
Sbjct: 92 YWILQAAQLLSFNFDDQTLNHVVQFLSNCRSPTGGFGGGPGQYAHLAPTYAAVNSLCIIG 151
Query: 449 RTQ 457
Q
Sbjct: 152 SEQ 154
>AY060784-1|AAL28332.1| 347|Drosophila melanogaster GH25366p
protein.
Length = 347
Score = 130 bits (315), Expect = 2e-30
Identities = 79/245 (32%), Positives = 129/245 (52%), Gaps = 4/245 (1%)
Frame = +2
Query: 32 AVVKFLDQCQHED-GGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWT 208
++++F+ +CQ + GG+ PHL T ++A+ I+ T +A + IDR ++ RF+
Sbjct: 81 SIIEFVKRCQCPNTGGFAPCEGHDPHLLYT---LSAIQILCTYDALEEIDREAVVRFVVG 137
Query: 209 VRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEAL-FDKTAEWIVSC--QTYEGGFA 379
++ DGSF K GE D R ++CA++ + + + +K ++++SC QT +GGF
Sbjct: 138 LQQPDGSFFGDKWGEVDTRFSFCAVASLTLLGRMEQTIDVEKAVKFVLSCCNQT-DGGFG 196
Query: 380 GCPGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCY 559
PG E+H G +C + +L +R L D+D L W RQ+ GG GR KL D CY
Sbjct: 197 SKPGAESHAGLIYCCVGFFSLTHRLHLLDVDKLGWWLCERQLP-SGGLNGRPEKLPDVCY 255
Query: 560 SFWQGAAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIYH 739
S+W A+ I+ + + LQ++IL C GG D+ G DI+H
Sbjct: 256 SWWVLASLTIMGRL-----------HWISSEKLQQFILSCQDTETGGFSDRTGNMPDIFH 304
Query: 740 TCYGL 754
T +G+
Sbjct: 305 TLFGI 309
>AF133269-1|AAD33042.1| 347|Drosophila melanogaster geranylgeranyl
transferase typeII beta-subunit protein.
Length = 347
Score = 130 bits (315), Expect = 2e-30
Identities = 79/245 (32%), Positives = 129/245 (52%), Gaps = 4/245 (1%)
Frame = +2
Query: 32 AVVKFLDQCQHED-GGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWT 208
++++F+ +CQ + GG+ PHL T ++A+ I+ T +A + IDR ++ RF+
Sbjct: 81 SIIEFVKRCQCPNTGGFAPCEGHDPHLLYT---LSAIQILCTYDALEEIDREAVVRFVVG 137
Query: 209 VRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEAL-FDKTAEWIVSC--QTYEGGFA 379
++ DGSF K GE D R ++CA++ + + + +K ++++SC QT +GGF
Sbjct: 138 LQQPDGSFFGDKWGEVDTRFSFCAVASLTLLGRMEQTIDVEKAVKFVLSCCNQT-DGGFG 196
Query: 380 GCPGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCY 559
PG E+H G +C + +L +R L D+D L W RQ+ GG GR KL D CY
Sbjct: 197 SKPGAESHAGLIYCCVGFFSLTHRLHLLDVDKLGWWLCERQLP-SGGLNGRPEKLPDVCY 255
Query: 560 SFWQGAAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIYH 739
S+W A+ I+ + + LQ++IL C GG D+ G DI+H
Sbjct: 256 SWWVLASLTIMGRL-----------HWISSEKLQQFILSCQDTETGGFSDRTGNMPDIFH 304
Query: 740 TCYGL 754
T +G+
Sbjct: 305 TLFGI 309
>AE014134-506|AAF51183.1| 347|Drosophila melanogaster CG18627-PA
protein.
Length = 347
Score = 130 bits (315), Expect = 2e-30
Identities = 79/245 (32%), Positives = 129/245 (52%), Gaps = 4/245 (1%)
Frame = +2
Query: 32 AVVKFLDQCQHED-GGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWT 208
++++F+ +CQ + GG+ PHL T ++A+ I+ T +A + IDR ++ RF+
Sbjct: 81 SIIEFVKRCQCPNTGGFAPCEGHDPHLLYT---LSAIQILCTYDALEEIDREAVVRFVVG 137
Query: 209 VRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEAL-FDKTAEWIVSC--QTYEGGFA 379
++ DGSF K GE D R ++CA++ + + + +K ++++SC QT +GGF
Sbjct: 138 LQQPDGSFFGDKWGEVDTRFSFCAVASLTLLGRMEQTIDVEKAVKFVLSCCNQT-DGGFG 196
Query: 380 GCPGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCY 559
PG E+H G +C + +L +R L D+D L W RQ+ GG GR KL D CY
Sbjct: 197 SKPGAESHAGLIYCCVGFFSLTHRLHLLDVDKLGWWLCERQLP-SGGLNGRPEKLPDVCY 255
Query: 560 SFWQGAAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIYH 739
S+W A+ I+ + + LQ++IL C GG D+ G DI+H
Sbjct: 256 SWWVLASLTIMGRL-----------HWISSEKLQQFILSCQDTETGGFSDRTGNMPDIFH 304
Query: 740 TCYGL 754
T +G+
Sbjct: 305 TLFGI 309
>U43588-1|AAC46972.1| 395|Drosophila melanogaster geranylgeranyl
transferase beta-subunit type I protein.
Length = 395
Score = 106 bits (255), Expect = 3e-23
Identities = 77/224 (34%), Positives = 111/224 (49%), Gaps = 4/224 (1%)
Frame = +2
Query: 95 QYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDG-EQDIRGA 271
Q+ HL TY ++ L +G D +DR S+ + V+ +GSF+ DG E D+R
Sbjct: 109 QWGHLAMTYTSLAVLVTLGDD--LSRLDRKSIVDGVAAVQKPEGSFSACIDGSEDDMRFV 166
Query: 272 YCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLAL--- 442
YCA +I M + + + + ++I Y+ GF+ EAHGG FC +A+L L
Sbjct: 167 YCAATICYMLDYWGDVNKETMFQFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQ 226
Query: 443 LNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQGAAFPIISAILSKDNKE 622
L+R ++ + RW + RQM GFQGR NK VD CYSFW GA+ I+ D E
Sbjct: 227 LHRLDATTVERMKRWLIFRQM---DGFQGRPNKPVDTCYSFWIGASLCIL------DGFE 277
Query: 623 LIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIYHTCYGL 754
L + + +E+IL GG P D +HT GL
Sbjct: 278 LTD-----YARNREFILSTQDKLIGGFAKWPQATPDPFHTYLGL 316
>AY119246-1|AAM51106.1| 395|Drosophila melanogaster SD20823p
protein.
Length = 395
Score = 106 bits (255), Expect = 3e-23
Identities = 77/224 (34%), Positives = 111/224 (49%), Gaps = 4/224 (1%)
Frame = +2
Query: 95 QYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDG-EQDIRGA 271
Q+ HL TY ++ L +G D +DR S+ + V+ +GSF+ DG E D+R
Sbjct: 109 QWGHLAMTYTSLAVLVTLGDD--LSRLDRKSIVDGVAAVQKPEGSFSACIDGSEDDMRFV 166
Query: 272 YCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLAL--- 442
YCA +I M + + + + ++I Y+ GF+ EAHGG FC +A+L L
Sbjct: 167 YCAATICYMLDYWGDVNKETMFQFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQ 226
Query: 443 LNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQGAAFPIISAILSKDNKE 622
L+R ++ + RW + RQM GFQGR NK VD CYSFW GA+ I+ D E
Sbjct: 227 LHRLDATTVERMKRWLIFRQM---DGFQGRPNKPVDTCYSFWIGASLCIL------DGFE 277
Query: 623 LIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIYHTCYGL 754
L + + +E+IL GG P D +HT GL
Sbjct: 278 LTD-----YARNREFILSTQDKLIGGFAKWPQATPDPFHTYLGL 316
>AE014134-811|AAF52177.1| 395|Drosophila melanogaster CG3469-PA
protein.
Length = 395
Score = 106 bits (255), Expect = 3e-23
Identities = 77/224 (34%), Positives = 111/224 (49%), Gaps = 4/224 (1%)
Frame = +2
Query: 95 QYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDG-EQDIRGA 271
Q+ HL TY ++ L +G D +DR S+ + V+ +GSF+ DG E D+R
Sbjct: 109 QWGHLAMTYTSLAVLVTLGDD--LSRLDRKSIVDGVAAVQKPEGSFSACIDGSEDDMRFV 166
Query: 272 YCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLAL--- 442
YCA +I M + + + + ++I Y+ GF+ EAHGG FC +A+L L
Sbjct: 167 YCAATICYMLDYWGDVNKETMFQFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQ 226
Query: 443 LNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQGAAFPIISAILSKDNKE 622
L+R ++ + RW + RQM GFQGR NK VD CYSFW GA+ I+ D E
Sbjct: 227 LHRLDATTVERMKRWLIFRQM---DGFQGRPNKPVDTCYSFWIGASLCIL------DGFE 277
Query: 623 LIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIYHTCYGL 754
L + + +E+IL GG P D +HT GL
Sbjct: 278 LTD-----YARNREFILSTQDKLIGGFAKWPQATPDPFHTYLGL 316
>U43587-1|AAC46971.1| 395|Drosophila melanogaster geranylgeranyl
transferase beta-subunit type I protein.
Length = 395
Score = 106 bits (254), Expect = 4e-23
Identities = 68/192 (35%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Frame = +2
Query: 95 QYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDG-EQDIRGA 271
Q+ HL TY ++ L +G D +DR S+ + V+ +GSF+ DG E D+R
Sbjct: 109 QWGHLAMTYTSLAVLVTLGDD--LSRLDRKSIVDGVAAVQKPEGSFSACIDGSEDDMRFV 166
Query: 272 YCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLAL--- 442
YCA +I M + + + + ++I Y+ GF+ EAHGG FC +A+L L
Sbjct: 167 YCAATICYMLDYWGDVNKETMFQFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQ 226
Query: 443 LNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQGAAFPIISAILSKDNKE 622
L+R ++ + RW + RQM GFQGR NK VD CYSFW GA+ I++ D
Sbjct: 227 LHRLDATTVERMKRWLIFRQM---DGFQGRPNKPVDTCYSFWIGASLCILNGFELTDYAR 283
Query: 623 LIETVLFNQSAL 658
E +L Q L
Sbjct: 284 NREFILSTQDKL 295
Score = 35.1 bits (77), Expect = 0.10
Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Frame = +2
Query: 164 YDSIDRSSLQRFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMT---NTYTEALFDKT 334
+ +++ ++ +F+ D F+ +GE +CA++ ++ + ++
Sbjct: 179 WGDVNKETMFQFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQLHRLDATTVERM 238
Query: 335 AEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIE 514
W++ Q GF G P Y+F ASL +LN +L D + ++ Q ++
Sbjct: 239 KRWLIFRQM--DGFQGRPNKPVDTCYSFWIGASLCILNGFELTDYARNREFILSTQDKLI 296
Query: 515 GGF 523
GGF
Sbjct: 297 GGF 299
>BT021296-1|AAX33444.1| 1288|Drosophila melanogaster RE26350p
protein.
Length = 1288
Score = 30.7 bits (66), Expect = 2.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 422 HRMHSHHVLPYQDNQQSHPH 363
H +H HH+ P Q QQ H H
Sbjct: 13 HHLHPHHLRPQQQQQQHHHH 32
>AE014297-1888|AAF55090.2| 1288|Drosophila melanogaster CG33967-PA
protein.
Length = 1288
Score = 30.7 bits (66), Expect = 2.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 422 HRMHSHHVLPYQDNQQSHPH 363
H +H HH+ P Q QQ H H
Sbjct: 13 HHLHPHHLRPQQQQQQHHHH 32
>BT030131-1|ABN49270.1| 1374|Drosophila melanogaster IP15972p
protein.
Length = 1374
Score = 28.7 bits (61), Expect = 9.0
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 484 VVSKQTDEDRGWISRKDKQTCRWM--LFFLARCCFSYYK 594
V + + +GW+ ++D +TC W F L+ YY+
Sbjct: 501 VKEESLNAKKGWLMKQDNRTCEWSKHWFTLSGAALFYYR 539
>AY118512-1|AAM49881.1| 911|Drosophila melanogaster LD14119p
protein.
Length = 911
Score = 28.7 bits (61), Expect = 9.0
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 484 VVSKQTDEDRGWISRKDKQTCRWM--LFFLARCCFSYYK 594
V + + +GW+ ++D +TC W F L+ YY+
Sbjct: 26 VKEESLNAKKGWLMKQDNRTCEWSKHWFTLSGAALFYYR 64
>AE014134-2505|AAN10878.2| 1373|Drosophila melanogaster CG3479-PB,
isoform B protein.
Length = 1373
Score = 28.7 bits (61), Expect = 9.0
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 484 VVSKQTDEDRGWISRKDKQTCRWM--LFFLARCCFSYYK 594
V + + +GW+ ++D +TC W F L+ YY+
Sbjct: 488 VKEESLNAKKGWLMKQDNRTCEWSKHWFTLSGAALFYYR 526
>AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA,
isoform A protein.
Length = 1553
Score = 28.7 bits (61), Expect = 9.0
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 484 VVSKQTDEDRGWISRKDKQTCRWM--LFFLARCCFSYYK 594
V + + +GW+ ++D +TC W F L+ YY+
Sbjct: 488 VKEESLNAKKGWLMKQDNRTCEWSKHWFTLSGAALFYYR 526
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,163,403
Number of Sequences: 53049
Number of extensions: 810727
Number of successful extensions: 2360
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2308
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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