Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3j04
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77659-6|CAB01167.1| 401|Caenorhabditis elegans Hypothetical pr... 280 7e-76
U10438-11|AAL50321.1| 335|Caenorhabditis elegans Hypothetical p... 126 2e-29
U10438-12|ABB88244.1| 325|Caenorhabditis elegans Hypothetical p... 116 1e-26
Z93393-4|CAB07699.1| 360|Caenorhabditis elegans Hypothetical pr... 111 5e-25
U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center... 28 8.2
U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center... 28 8.2
U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center... 28 8.2
U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center... 28 8.2
AF125960-1|AAD14735.1| 356|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z77659-6|CAB01167.1| 401|Caenorhabditis elegans Hypothetical
protein F23B12.6 protein.
Length = 401
Score = 280 bits (687), Expect = 7e-76
Identities = 126/246 (51%), Positives = 166/246 (67%)
Frame = +2
Query: 17 HETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQR 196
++ + ++ FL C+H +GGYGGGP Q HL TYAAV L + +EA SI+R +L
Sbjct: 108 NDVIENIIVFLKSCEHPEGGYGGGPGQLAHLAPTYAAVMCLVSLQKEEALRSINRVTLFN 167
Query: 197 FLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGF 376
FL + G F +H+ GE D+R AYCA++ ++ + + + AEWI+SCQ++EGGF
Sbjct: 168 FLKKCKHESGGFYMHEGGEIDMRSAYCALATCEIVGLPMDEISNGVAEWIISCQSFEGGF 227
Query: 377 AGCPGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGC 556
G P EAHGGY FC +ASL LLNR +L D++ LLRW+ RQMR EGGFQGRTNKLVDGC
Sbjct: 228 GGEPYTEAHGGYTFCAVASLVLLNRFRLADMEGLLRWATRRQMRFEGGFQGRTNKLVDGC 287
Query: 557 YSFWQGAAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIY 736
YSFWQGA FP++ + ++ + L E LF L+EYIL+ CQ+ GG DKP KP D+Y
Sbjct: 288 YSFWQGAIFPLLDGEMEREGRSL-EKGLFEARMLEEYILVGCQSVHGGFKDKPDKPVDLY 346
Query: 737 HTCYGL 754
HTCY L
Sbjct: 347 HTCYVL 352
Score = 36.7 bits (81), Expect = 0.018
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 9/181 (4%)
Frame = +2
Query: 8 MPDHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYD--SIDR 181
+P E + V +++ CQ +GG+GG P H G T+ AV +L ++ D + R
Sbjct: 204 LPMDEISNGVAEWIISCQSFEGGFGGEPYTEAHGGYTFCAVASLVLLNRFRLADMEGLLR 263
Query: 182 SSLQRFLWTVRDVDGSFALHKDGEQDI-RGAYCAISIAKMT---NTYTEALFD--KTAEW 343
+ +R + G DG +GA + +M + + LF+ E+
Sbjct: 264 WATRRQMRFEGGFQGRTNKLVDGCYSFWQGAIFPLLDGEMEREGRSLEKGLFEARMLEEY 323
Query: 344 I-VSCQTYEGGFAGCPGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGG 520
I V CQ+ GGF P + ++ L++ + L +L VN I
Sbjct: 324 ILVGCQSVHGGFKDKPDKPVDLYHTCYVLSGLSVAQKYSLARDGKILGGDVNMLAEINPV 383
Query: 521 F 523
F
Sbjct: 384 F 384
>U10438-11|AAL50321.1| 335|Caenorhabditis elegans Hypothetical
protein B0280.1a protein.
Length = 335
Score = 126 bits (304), Expect = 2e-29
Identities = 73/240 (30%), Positives = 113/240 (47%)
Frame = +2
Query: 35 VVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVR 214
+V ++ C++ DGGYG P HL T AV L I + E D+ ++ ++ ++
Sbjct: 77 IVNYVLGCRNTDGGYGPAPGHDSHLLHTLCAVQTLIIFNSIEKADA---DTISEYVKGLQ 133
Query: 215 DVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGM 394
DGSF GE D R C+++ + + D +++ C +GGF PG
Sbjct: 134 QEDGSFCGDLSGEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRPGS 193
Query: 395 EAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQG 574
E+H G +C + +LA+ R D D W RQ GG GR KL D CYS+W
Sbjct: 194 ESHSGQIYCCVGALAIAGRLDEIDRDRTAEWLAFRQCD-SGGLNGRPEKLPDVCYSWWVL 252
Query: 575 AAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPGKPRDIYHTCYGL 754
A+ AIL + N + A++++I C + GG D+PG D +HT +G+
Sbjct: 253 ASL----AILGRLN-------FIDSDAMKKFIYACQDDETGGFADRPGDCADPFHTVFGI 301
Score = 63.7 bits (148), Expect = 1e-10
Identities = 51/192 (26%), Positives = 78/192 (40%)
Frame = +2
Query: 14 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQ 193
D +T+S VK L Q EDG + G T ++ ++G +++ S
Sbjct: 121 DADTISEYVKGLQQ---EDGSFCGDLSGEVDTRFTLCSLATCHLLGR---LSTLNIDSAV 174
Query: 194 RFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGG 373
RFL + DG F E YC + + E D+TAEW+ Q GG
Sbjct: 175 RFLMRCYNTDGGFGTRPGSESHSGQIYCCVGALAIAGRLDEIDRDRTAEWLAFRQCDSGG 234
Query: 374 FAGCPGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDG 553
G P Y++ +ASLA+L R D D++ ++ Q GGF R D
Sbjct: 235 LNGRPEKLPDVCYSWWVLASLAILGRLNFIDSDAMKKFIYACQDDETGGFADRPGDCADP 294
Query: 554 CYSFWQGAAFPI 589
++ + AA +
Sbjct: 295 FHTVFGIAALSL 306
Score = 57.2 bits (132), Expect = 1e-08
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 1/152 (0%)
Frame = +2
Query: 26 LSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLW 205
+ + V+FL +C + DGG+G P H G Y V AL+I G D IDR +L
Sbjct: 170 IDSAVRFLMRCYNTDGGFGTRPGSESHSGQIYCCVGALAIAGR---LDEIDRDRTAEWLA 226
Query: 206 TVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYE-GGFAG 382
+ G + D+ ++ ++ + D ++I +CQ E GGFA
Sbjct: 227 FRQCDSGGLNGRPEKLPDVCYSWWVLASLAILGRLNFIDSDAMKKFIYACQDDETGGFAD 286
Query: 383 CPGMEAHGGYAFCGIASLALLNRTQLCDIDSL 478
PG A + GIA+L+L L +D +
Sbjct: 287 RPGDCADPFHTVFGIAALSLFGDDTLESVDPI 318
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/153 (20%), Positives = 66/153 (43%)
Frame = +2
Query: 260 IRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLA 439
+ G Y ++ ++ ++ +++ C+ +GG+ PG ++H + C + +L
Sbjct: 53 VSGIYWCVNAMDLSKQLERMSTEEIVNYVLGCRNTDGGYGPAPGHDSHLLHTLCAVQTLI 112
Query: 440 LLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQGAAFPIISAILSKDNK 619
+ N + D D++ + Q +G F G + VD ++ A ++ +
Sbjct: 113 IFNSIEKADADTISEYVKGLQQE-DGSFCGDLSGEVDTRFTLCSLATCHLLGRL------ 165
Query: 620 ELIETVLFNQSALQEYILICCQNRDGGLIDKPG 718
+ L SA++ L+ C N DGG +PG
Sbjct: 166 ----STLNIDSAVR--FLMRCYNTDGGFGTRPG 192
>U10438-12|ABB88244.1| 325|Caenorhabditis elegans Hypothetical
protein B0280.1b protein.
Length = 325
Score = 116 bits (280), Expect = 1e-26
Identities = 69/228 (30%), Positives = 106/228 (46%)
Frame = +2
Query: 35 VVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVR 214
+V ++ C++ DGGYG P HL T AV L I + E D+ ++ ++ ++
Sbjct: 77 IVNYVLGCRNTDGGYGPAPGHDSHLLHTLCAVQTLIIFNSIEKADA---DTISEYVKGLQ 133
Query: 215 DVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGM 394
DGSF GE D R C+++ + + D +++ C +GGF PG
Sbjct: 134 QEDGSFCGDLSGEVDTRFTLCSLATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRPGS 193
Query: 395 EAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQG 574
E+H G +C + +LA+ R D D W RQ GG GR KL D CYS+W
Sbjct: 194 ESHSGQIYCCVGALAIAGRLDEIDRDRTAEWLAFRQCD-SGGLNGRPEKLPDVCYSWWVL 252
Query: 575 AAFPIISAILSKDNKELIETVLFNQSALQEYILICCQNRDGGLIDKPG 718
A+ AIL + N + A++++I C + GG D+PG
Sbjct: 253 ASL----AILGRLN-------FIDSDAMKKFIYACQDDETGGFADRPG 289
Score = 62.5 bits (145), Expect = 3e-10
Identities = 58/213 (27%), Positives = 85/213 (39%)
Frame = +2
Query: 14 DHETLSAVVKFLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQ 193
D +T+S VK L Q EDG + G T ++ ++G +++ S
Sbjct: 121 DADTISEYVKGLQQ---EDGSFCGDLSGEVDTRFTLCSLATCHLLGR---LSTLNIDSAV 174
Query: 194 RFLWTVRDVDGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGG 373
RFL + DG F E YC + + E D+TAEW+ Q GG
Sbjct: 175 RFLMRCYNTDGGFGTRPGSESHSGQIYCCVGALAIAGRLDEIDRDRTAEWLAFRQCDSGG 234
Query: 374 FAGCPGMEAHGGYAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDG 553
G P Y++ +ASLA+L R D D++ ++ Q GGF R V
Sbjct: 235 LNGRPEKLPDVCYSWWVLASLAILGRLNFIDSDAMKKFIYACQDDETGGFADRPGDCVSF 294
Query: 554 CYSFWQGAAFPIISAILSKDNKELIETVLFNQS 652
+ Q F + S + K+L E FN S
Sbjct: 295 LNNI-QKFIFVLQSNNVLATTKQLFE-CSFNNS 325
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/153 (20%), Positives = 66/153 (43%)
Frame = +2
Query: 260 IRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLA 439
+ G Y ++ ++ ++ +++ C+ +GG+ PG ++H + C + +L
Sbjct: 53 VSGIYWCVNAMDLSKQLERMSTEEIVNYVLGCRNTDGGYGPAPGHDSHLLHTLCAVQTLI 112
Query: 440 LLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQGAAFPIISAILSKDNK 619
+ N + D D++ + Q +G F G + VD ++ A ++ +
Sbjct: 113 IFNSIEKADADTISEYVKGLQQE-DGSFCGDLSGEVDTRFTLCSLATCHLLGRL------ 165
Query: 620 ELIETVLFNQSALQEYILICCQNRDGGLIDKPG 718
+ L SA++ L+ C N DGG +PG
Sbjct: 166 ----STLNIDSAVR--FLMRCYNTDGGFGTRPG 192
>Z93393-4|CAB07699.1| 360|Caenorhabditis elegans Hypothetical
protein Y48E1B.3 protein.
Length = 360
Score = 111 bits (267), Expect = 5e-25
Identities = 77/228 (33%), Positives = 120/228 (52%), Gaps = 11/228 (4%)
Frame = +2
Query: 104 HLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFLWTVRDVDGSFALHKDG-EQDIRGAYCA 280
+L TY+A+ +L+I+G D +DR ++ + + T + +G F G E D+R +CA
Sbjct: 115 NLAQTYSALLSLAILGDD--LKKVDRKAILKTVKTAQRDNGCFWSQGVGSESDMRFVFCA 172
Query: 281 ISIAKMTNTYTEALFD--KTAEWIVSCQTYEGGFAGCPGMEAHGGYAFCGIASLALLNR- 451
++I+ + + E D K A ++ +GG PG E+HGG FC IASLAL NR
Sbjct: 173 VAISHILDGDKEQTIDWTKLAGFLRQSLNIDGGIGQAPGDESHGGSTFCAIASLALSNRL 232
Query: 452 -TQLC----DIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQGAAFPIISAILSKDN 616
T+ DID L+RW++ +Q + GF GR +K D CY+FW GA I++A
Sbjct: 233 WTEEVLTRRDIDRLIRWAIQKQ---DIGFHGRAHKPDDSCYAFWIGATLKILNAY----- 284
Query: 617 KELIETVLFNQSALQEYILICCQNRDGGL--IDKPGKPRDIYHTCYGL 754
L ++ L+E+++IC GG +PG DI HT + +
Sbjct: 285 ------HLVSKQHLREFLMICQHPHIGGFCKYPEPGGYSDILHTYFSI 326
Score = 46.0 bits (104), Expect = 3e-05
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 4/160 (2%)
Frame = +2
Query: 44 FLDQCQHEDGGYGGGPRQYPHLGTTYAAVNALSIIGTDEAYDSIDRSSLQRFL-WTVRDV 220
FL Q + DGG G P H G+T+ A+ +L++ + + R + R + W ++
Sbjct: 195 FLRQSLNIDGGIGQAPGDESHGGSTFCAIASLALSNRLWTEEVLTRRDIDRLIRWAIQKQ 254
Query: 221 DGSFALHKDGEQDIRGAYCAISIAKMTNTYTEALFDKTAEWIVSCQ-TYEGGFAGCPGME 397
D F D A+ + K+ N Y E+++ CQ + GGF P
Sbjct: 255 DIGFHGRAHKPDDSCYAFWIGATLKILNAYHLVSKQHLREFLMICQHPHIGGFCKYPEPG 314
Query: 398 AHGG--YAFCGIASLALLNRTQLCDIDSLLRWSVNRQMRI 511
+ + + IA+L+LL + + L S+ RI
Sbjct: 315 GYSDILHTYFSIAALSLLGEPAVNPVHPSLNVSMRVAERI 354
>U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center
kinase family protein1, isoform d protein.
Length = 638
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 597 ALIIGKAAPCQKE*HPSTSLFVLP*NPPSIL 505
A+ + P + HP LF++P NPP +L
Sbjct: 204 AIELANGEPPHSDLHPMRVLFLIPKNPPPVL 234
>U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center
kinase family protein1, isoform b protein.
Length = 651
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 597 ALIIGKAAPCQKE*HPSTSLFVLP*NPPSIL 505
A+ + P + HP LF++P NPP +L
Sbjct: 217 AIELANGEPPHSDLHPMRVLFLIPKNPPPVL 247
>U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center
kinase family protein1, isoform c protein.
Length = 650
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 597 ALIIGKAAPCQKE*HPSTSLFVLP*NPPSIL 505
A+ + P + HP LF++P NPP +L
Sbjct: 216 AIELANGEPPHSDLHPMRVLFLIPKNPPPVL 246
>U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center
kinase family protein1, isoform a protein.
Length = 653
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 597 ALIIGKAAPCQKE*HPSTSLFVLP*NPPSIL 505
A+ + P + HP LF++P NPP +L
Sbjct: 219 AIELANGEPPHSDLHPMRVLFLIPKNPPPVL 249
>AF125960-1|AAD14735.1| 356|Caenorhabditis elegans Hypothetical
protein T12B3.3 protein.
Length = 356
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +2
Query: 434 LALLNRTQLCDIDSLLRWSVNRQMRIEGGFQGRTNKLVDGCYSFWQ 571
LA ++R ++ D++ +++W+V R+ + N+LVD + +Q
Sbjct: 152 LATVSRERVPDMEDVVKWAVENNTRMLFDVKDSDNELVDQIANLFQ 197
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,678,630
Number of Sequences: 27780
Number of extensions: 417199
Number of successful extensions: 1340
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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