Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3i22
         (529 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065801-1|BAC06020.1|  308|Homo sapiens seven transmembrane hel...    30   5.8  
Y00057-1|CAA68266.1|  761|Homo sapiens protein ( Human mRNA for ...    29   7.6  
X64072-1|CAA45427.1|  769|Homo sapiens integrin beta-2 subunit p...    29   7.6  
U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating...    29   7.6  
M15395-1|AAA59490.1|  769|Homo sapiens LYAM1 protein.                  29   7.6  
BC021077-1|AAH21077.1|  758|Homo sapiens ITGB2 protein protein.        29   7.6  
BC005861-1|AAH05861.1|  769|Homo sapiens ITGB2 protein protein.        29   7.6  
AY653037-1|AAT74745.1|  162|Homo sapiens proteoglycan 4 protein.       29   7.6  
AL163300-3|CAB90553.1|  769|Homo sapiens cell surface adhesion g...    29   7.6  
AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.       29   7.6  
AK222505-1|BAD96225.1|  769|Homo sapiens integrin beta chain, be...    29   7.6  
AK131434-1|BAD18580.1|  933|Homo sapiens protein ( Homo sapiens ...    29   7.6  
AJ628243-1|CAF31636.1|   38|Homo sapiens keratin associated prot...    29   7.6  
AB126076-1|BAD20203.1|  165|Homo sapiens keratin associated prot...    29   7.6  
AB126073-1|BAD20200.1|  288|Homo sapiens keratin associated prot...    29   7.6  

>AB065801-1|BAC06020.1|  308|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 308

 Score = 29.9 bits (64), Expect = 5.8
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -2

Query: 186 VQFLVELQGDGHPLQPPRIAD-ITVCNLLIASMRSHILDLFCTVNFLYFEILSFV 25
           V F++ L   GH + P    + + +  L  AS+R +I+   C ++ L F+I++ V
Sbjct: 159 VLFILRLPFCGHQIIPHTYGEHMGIARLSCASIRVNIIYGLCAISILVFDIIAIV 213


>Y00057-1|CAA68266.1|  761|Homo sapiens protein ( Human mRNA for
           beta-subunit of cell surface adhesion glycoproteins
           LFA-1, CR3 and p150,95.  ).
          Length = 761

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 143 CSGCPSPCNSTRNCTPC 193
           C GCPSPC    +C  C
Sbjct: 607 CPGCPSPCGKYISCAEC 623


>X64072-1|CAA45427.1|  769|Homo sapiens integrin beta-2 subunit
           protein.
          Length = 769

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 143 CSGCPSPCNSTRNCTPC 193
           C GCPSPC    +C  C
Sbjct: 615 CPGCPSPCGKYISCAEC 631


>U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating
           factor protein.
          Length = 1404

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 111 YKLLCPQFEAVAADAHRPVTPP 176
           Y   CP +E+  A+ H P +PP
Sbjct: 93  YDKCCPDYESFCAEVHNPTSPP 114


>M15395-1|AAA59490.1|  769|Homo sapiens LYAM1 protein.
          Length = 769

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 143 CSGCPSPCNSTRNCTPC 193
           C GCPSPC    +C  C
Sbjct: 615 CPGCPSPCGKYISCAEC 631


>BC021077-1|AAH21077.1|  758|Homo sapiens ITGB2 protein protein.
          Length = 758

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 143 CSGCPSPCNSTRNCTPC 193
           C GCPSPC    +C  C
Sbjct: 604 CPGCPSPCGKYISCAEC 620


>BC005861-1|AAH05861.1|  769|Homo sapiens ITGB2 protein protein.
          Length = 769

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 143 CSGCPSPCNSTRNCTPC 193
           C GCPSPC    +C  C
Sbjct: 615 CPGCPSPCGKYISCAEC 631


>AY653037-1|AAT74745.1|  162|Homo sapiens proteoglycan 4 protein.
          Length = 162

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 111 YKLLCPQFEAVAADAHRPVTPP 176
           Y   CP +E+  A+ H P +PP
Sbjct: 62  YDKCCPDYESFCAEVHNPTSPP 83


>AL163300-3|CAB90553.1|  769|Homo sapiens cell surface adhesion
           glycoprotein (LFA-1/CR3/P150,959 beta subunit precursor)
           protein.
          Length = 769

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 143 CSGCPSPCNSTRNCTPC 193
           C GCPSPC    +C  C
Sbjct: 615 CPGCPSPCGKYISCAEC 631


>AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.
          Length = 1404

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 111 YKLLCPQFEAVAADAHRPVTPP 176
           Y   CP +E+  A+ H P +PP
Sbjct: 93  YDKCCPDYESFCAEVHNPTSPP 114


>AK222505-1|BAD96225.1|  769|Homo sapiens integrin beta chain, beta
           2 precursor variant protein.
          Length = 769

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 143 CSGCPSPCNSTRNCTPC 193
           C GCPSPC    +C  C
Sbjct: 615 CPGCPSPCGKYISCAEC 631


>AK131434-1|BAD18580.1|  933|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16561 fis, clone SYNOV4003981, moderately
           similar to Homo sapiens proteoglycan 4, (megakaryocyte
           stimulating ).
          Length = 933

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 111 YKLLCPQFEAVAADAHRPVTPP 176
           Y   CP +E+  A+ H P +PP
Sbjct: 52  YDKCCPDYESFCAEVHNPTSPP 73


>AJ628243-1|CAF31636.1|   38|Homo sapiens keratin associated protein
           5-3 protein.
          Length = 38

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 146 SGCPSPCNSTRNCTPCCSGGS 208
           SGC S C  +  C PCCS  S
Sbjct: 7   SGCGSSCCQSSCCNPCCSQSS 27


>AB126076-1|BAD20203.1|  165|Homo sapiens keratin associated protein
           protein.
          Length = 165

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 146 SGCPSPCNSTRNCTPCCSGGS 208
           SGC S C  +  C PCCS  S
Sbjct: 134 SGCGSSCCQSSCCNPCCSQSS 154


>AB126073-1|BAD20200.1|  288|Homo sapiens keratin associated protein
           protein.
          Length = 288

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 146 SGCPSPCNSTRNCTPCCSGGS 208
           SGC S C  +  C PCCS  S
Sbjct: 257 SGCGSSCCQSSCCNPCCSQSS 277


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,544,009
Number of Sequences: 237096
Number of extensions: 1347855
Number of successful extensions: 3426
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3421
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)