Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3i21
(680 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0556 + 18592393-18592580,18592839-18593031,18593110-185934... 34 0.12
04_03_0222 + 12928470-12928779,12931919-12932052,12932352-129325... 34 0.12
03_01_0520 - 3900387-3900613,3900812-3900853,3902092-3902210,390... 31 0.64
08_02_0208 - 14318485-14319283,14319704-14320170 31 1.1
06_01_0641 - 4652380-4653771,4653850-4654521,4654536-4654707,465... 30 2.0
09_02_0524 - 10207711-10208154,10208237-10208338,10208439-102085... 29 2.6
03_02_0704 - 10542187-10542339,10542466-10542522,10542667-105427... 29 2.6
02_02_0012 - 6092081-6092170,6092282-6092369,6093659-6094608 29 2.6
07_01_0817 + 6533316-6533849,6533996-6534064,6534528-6534767,653... 29 3.4
07_01_0384 + 2861819-2862169 29 3.4
05_05_0185 + 23064249-23064448,23064881-23064950,23065082-230651... 29 3.4
04_04_0416 + 25042937-25043350,25044038-25044238,25044343-250445... 29 3.4
03_03_0188 + 15269347-15270213 29 3.4
02_04_0160 - 20427774-20428217,20428301-20428402,20428503-204285... 29 3.4
09_04_0230 + 15872505-15872851,15872963-15873140 28 6.0
05_07_0026 - 27136386-27137264 28 6.0
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 28 6.0
09_06_0202 - 21550460-21550813,21550858-21550944,21551887-21551892 28 7.9
08_02_1406 - 26854845-26855606 28 7.9
02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,850... 28 7.9
01_06_0999 + 33692480-33692725 28 7.9
08_01_0855 + 8407411-8407628,8408231-8408267 23 9.3
>08_02_0556 +
18592393-18592580,18592839-18593031,18593110-18593499,
18593576-18593686,18593789-18593867,18594048-18594109,
18594182-18594238,18594498-18594581
Length = 387
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 40 PPHSVEPSDWESICHRIWSDMTPTHALANNYHRRVQNASHHHT 168
PP+ +E W+ +C +WSD A N R++ HHT
Sbjct: 203 PPYWIEQKWWDMLC-DLWSDENVKKVSAQNSKNRMEGGGVHHT 244
>04_03_0222 +
12928470-12928779,12931919-12932052,12932352-12932548,
12932807-12932999,12933078-12933467,12933544-12933623,
12933757-12933851,12933869-12934077,12934150-12934206,
12934466-12934549
Length = 582
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 40 PPHSVEPSDWESICHRIWSDMTPTHALANNYHRRVQNASHHHT 168
PP+ +E W+ +C +WSD A N R++ HHT
Sbjct: 354 PPYWIEQKWWDMLC-DLWSDENVKKVSAQNSKNRMEGGGVHHT 395
>03_01_0520 -
3900387-3900613,3900812-3900853,3902092-3902210,
3903633-3903712,3903829-3903856,3904151-3904272,
3904714-3904857,3904897-3906327
Length = 730
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +1
Query: 118 LANNYHRRVQNASHHHTRSAVVGTQWPKKDSR*YVVHHRPA-----HDHHVQNHRQQLY 279
L N+H++ Q HHH Q + +R + HHR H HH QNH QQ Y
Sbjct: 146 LQQNHHQQYQQ--HHHQ-------QQYEHQNRIHFQHHRQQQQYQQHQHHNQNHHQQQY 195
>08_02_0208 - 14318485-14319283,14319704-14320170
Length = 421
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -2
Query: 265 GGSGHGGREPVGGGQHTTLSPSWATGSRP 179
G GH G + VGGGQ P WA RP
Sbjct: 73 GAPGHAGTQ-VGGGQSAWQPPDWAIEPRP 100
>06_01_0641 -
4652380-4653771,4653850-4654521,4654536-4654707,
4655515-4655690
Length = 803
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -2
Query: 376 CVSHILSILLDGIFDVVDCVFFFANCAALLQDRIVADGGSGHGGREPVGGGQHT-TLSPS 200
C+ H +LL G C+ + L D + GG G GG PV QH ++
Sbjct: 525 CIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGGGGGGGGGPVIPWQHRFRIAAE 584
Query: 199 WATG 188
ATG
Sbjct: 585 IATG 588
>09_02_0524 -
10207711-10208154,10208237-10208338,10208439-10208531,
10208612-10208683,10208730-10208798,10208928-10209175,
10209256-10209370
Length = 380
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 34 YQPPHSVEPSDWESICHRIWSD-MTPTHALANNYHRRVQN-ASHHHTRSAV 180
Y P V P DW+ + +WSD + N+ +R Q SH T+S V
Sbjct: 143 YNCPSHVAPEDWQWLIDNLWSDEQFQKRSKHNSINRSKQEMKSHVGTKSIV 193
>03_02_0704 -
10542187-10542339,10542466-10542522,10542667-10542737,
10542823-10542901,10543021-10543161
Length = 166
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -2
Query: 292 LLQDRIVADGGS---GHGGREPVGGGQHTTLSPSWATGSR 182
+LQD + DGGS G GGR P G + T ++P A R
Sbjct: 127 MLQDIVSGDGGSRGGGVGGRVPSDGTRRTRVAPYPAQSRR 166
>02_02_0012 - 6092081-6092170,6092282-6092369,6093659-6094608
Length = 375
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Frame = -2
Query: 298 AALLQDRIVADGGSGHGGREPV------GGGQHTTLSPSWATGSRPRHF 170
AA+ R+VA G HGG + V GG + SWA + P F
Sbjct: 267 AAIGDGRVVAIGAGSHGGEQAVYLLTTGEGGDKNGAAQSWARAAAPPEF 315
>07_01_0817 +
6533316-6533849,6533996-6534064,6534528-6534767,
6537747-6537965,6538041-6538133,6538231-6538332,
6538415-6538858
Length = 566
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 37 QPPHSVEPSDWESICHRIWSD-MTPTHALANNYHRRVQN-ASHHHTRSAV 180
Q P V P DW+ + +WSD + N+ +R Q SH T+S V
Sbjct: 330 QCPSHVAPEDWQWLIDNLWSDEQFQKRSKQNSINRSKQEMKSHVGTKSIV 379
>07_01_0384 + 2861819-2862169
Length = 116
Score = 29.1 bits (62), Expect = 3.4
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 164 WWWLAFWTRRW 132
WWW +W RRW
Sbjct: 39 WWWQRWWQRRW 49
>05_05_0185 +
23064249-23064448,23064881-23064950,23065082-23065120,
23065639-23066067,23067322-23067627
Length = 347
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 20 TQHHDTSHHIP*NHQTGKVS 79
T++HDTSH I NH T VS
Sbjct: 66 TRNHDTSHDIEQNHDTSHVS 85
>04_04_0416 +
25042937-25043350,25044038-25044238,25044343-25044525,
25044975-25045084,25045317-25045376,25045620-25045911,
25046780-25046967,25047275-25048149,25048846-25049805,
25050025-25050068,25050860-25050925,25051176-25051364
Length = 1193
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 391 VSQPLCVSHILSILLDGIFDVVDCVFFFANCAALLQDRIVADGGS 257
VS P C+ H ++ + +F VDC+ A +L D G S
Sbjct: 599 VSIPGCIVHCFGVITEHLFKEVDCLLLGAAQGLVLSDPFRCCGSS 643
>03_03_0188 + 15269347-15270213
Length = 288
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 367 HILSILLDGIFDVVDCVFFFANCAALLQDRIVADGGSGHGG-REPVGGG 224
H + + G+F+ D A AA D++V GG+GHGG P+G G
Sbjct: 232 HHHGMTMGGLFNPFDDYEAAAAAAAAEGDKVV-HGGAGHGGFFSPLGAG 279
>02_04_0160 -
20427774-20428217,20428301-20428402,20428503-20428595,
20428675-20428860,20428966-20429213,20429292-20429412,
20430674-20430718,20431086-20431138,20431152-20431173
Length = 437
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 37 QPPHSVEPSDWESICHRIWSD-MTPTHALANNYHRRVQN-ASHHHTRSAV 180
Q P V P DW+ + +WSD + N+ +R Q SH T+S V
Sbjct: 201 QCPSHVAPEDWQWLIDNLWSDEQFQKRSKQNSINRSKQEMKSHVGTKSIV 250
>09_04_0230 + 15872505-15872851,15872963-15873140
Length = 174
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +1
Query: 154 SHHHTRSAVVGTQWPKKDSR*YVVHHRPAHDHHVQNHRQQLYDPAIMLHNLRKK 315
S H R VVG Q +R HHR H H V Q + P H R++
Sbjct: 40 SIHQQRLRVVGLQIVLAQTR---HHHRQQHGHVVLKQMQMVSPPPAARHRRRRR 90
>05_07_0026 - 27136386-27137264
Length = 292
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 83 WQILSQSDGSTECGGWYHDAAC 18
W I S +G+T GG Y DA C
Sbjct: 21 WFIASGGEGATAAGGTYDDAIC 42
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3
Query: 600 WDIEWHNHDRQ*H 562
WD+E H+HDRQ H
Sbjct: 573 WDVEGHHHDRQQH 585
>09_06_0202 - 21550460-21550813,21550858-21550944,21551887-21551892
Length = 148
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 394 VVSQPLCVSHILSILLDGIFDVVDCVFFFANCAALLQDRIVADGGSGHGGRE 239
V + + +S +LS + GI V +A+ + I +DGGSG GGRE
Sbjct: 61 VGEETMTMSEVLSRVACGIGGVRRRRMGKTTASAVAGEDIGSDGGSGGGGRE 112
>08_02_1406 - 26854845-26855606
Length = 253
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +3
Query: 555 CARATDGRDYAIRCPKEQTAYCGPNRQPPPPRCVELVP 668
CA DG + C K + CG PRC L P
Sbjct: 93 CAMTLDGFSHVYTCSKSRHLACGRGGFRAHPRCGNLPP 130
>02_02_0279 -
8507603-8507620,8508040-8508060,8508613-8508835,
8509204-8509553,8509631-8509729,8509811-8510105,
8510200-8510405,8510498-8510689,8510766-8511163,
8511258-8511444,8511473-8511528,8511800-8511872,
8512012-8512872,8514353-8514778
Length = 1134
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -2
Query: 289 LQDRIVADGGSGHGGREPVGGGQHTTLSPSWAT-GSRP 179
L R VADGG G G GGG L A G RP
Sbjct: 72 LAQRGVADGGGGRLGARGAGGGDGGRLGARGAADGGRP 109
>01_06_0999 + 33692480-33692725
Length = 81
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -2
Query: 301 CAALLQDRIVADGGSGHGGREPVGGGQHTTLSPSWATGSRPR 176
C A L D V +G G GGR +GGG + T PR
Sbjct: 19 CVASLMD--VTEGRRGGGGRAYIGGGGVGARGSATRTSGSPR 58
>08_01_0855 + 8407411-8407628,8408231-8408267
Length = 84
Score = 23.4 bits (48), Expect(2) = 9.3
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = -1
Query: 266 RWFWTWW 246
RW+W WW
Sbjct: 23 RWWWWWW 29
Score = 23.0 bits (47), Expect(2) = 9.3
Identities = 5/7 (71%), Positives = 6/7 (85%)
Frame = -1
Query: 263 WFWTWWS 243
W+W WWS
Sbjct: 25 WWWWWWS 31
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,509,504
Number of Sequences: 37544
Number of extensions: 463353
Number of successful extensions: 2303
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2285
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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