Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3i21
         (680 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC108734-1|AAI08735.1|  409|Homo sapiens testis expressed 13A pr...    30   6.6  
BC042547-1|AAH42547.1|  409|Homo sapiens TEX13A protein protein.       30   6.6  
AF285597-1|AAK31976.1|  409|Homo sapiens testis protein TEX13A p...    30   6.6  
AK128083-1|BAC87264.1|  225|Homo sapiens protein ( Homo sapiens ...    30   8.8  

>BC108734-1|AAI08735.1|  409|Homo sapiens testis expressed 13A
           protein.
          Length = 409

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 58  PSDWESICHRIWSDMTPTHALANNYHRRVQNASHHH 165
           PSDWE+    +WSD  P H + +  H R +  S  H
Sbjct: 333 PSDWEAFDTSLWSDGGP-HRIDHQEHPRDRRYSEPH 367


>BC042547-1|AAH42547.1|  409|Homo sapiens TEX13A protein protein.
          Length = 409

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 58  PSDWESICHRIWSDMTPTHALANNYHRRVQNASHHH 165
           PSDWE+    +WSD  P H + +  H R +  S  H
Sbjct: 333 PSDWEAFDTSLWSDGGP-HRIDHQEHPRDRRYSEPH 367


>AF285597-1|AAK31976.1|  409|Homo sapiens testis protein TEX13A
           protein.
          Length = 409

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 58  PSDWESICHRIWSDMTPTHALANNYHRRVQNASHHH 165
           PSDWE+    +WSD  P H + +  H R +  S  H
Sbjct: 333 PSDWEAFDTSLWSDGGP-HRIDHQEHPRDRRYSEPH 367


>AK128083-1|BAC87264.1|  225|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46204 fis, clone TESTI4009501. ).
          Length = 225

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
 Frame = +1

Query: 109 THALANNYHRRVQNASHHHTRSAVVGTQWPKKDSR*YVVHHRPAHDH-HVQNHRQQLYDP 285
           TH  A++ H      SH+HTR+  +        +    + H   H H H+  H   L   
Sbjct: 129 THTRAHSTHAHTHAHSHYHTRTLTLTHSHAHSCTLTSTITHMHTHTHTHMHTHTSTLTRT 188

Query: 286 AIMLH 300
             + H
Sbjct: 189 LTLTH 193


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,930,912
Number of Sequences: 237096
Number of extensions: 2469882
Number of successful extensions: 8785
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8732
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)