Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3i21
(680 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 27 0.17
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 27 0.22
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.51
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 25 0.51
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 25 0.51
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.67
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 25 0.88
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 2.7
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 2.7
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 2.7
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 4.7
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 4.7
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 22 4.7
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 4.7
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.2
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.2
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.2
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.2
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.2
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.2
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.2
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 21 8.2
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 21 8.2
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 21 8.2
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 27.1 bits (57), Expect = 0.17
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 191 WVPTTALRVWWWLAFWTRRW*LFARACVGVIS 96
++P+ + V W+AFW + + AR +GV S
Sbjct: 221 YIPSALIVVMSWIAFWIKPEAIPARVTLGVTS 252
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 26.6 bits (56), Expect = 0.22
Identities = 10/17 (58%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
Frame = +3
Query: 603 EQTAYCGPNRQ-PPPPR 650
E+ +C PNR+ PPPPR
Sbjct: 1690 EELNHCAPNRRCPPPPR 1706
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.51
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 203 FLGH-WVPTTALRVWWWLAFWTRRW*LFARACVGVIS 96
+L H ++PT + + W++FW + AR +GV S
Sbjct: 247 YLFHTYIPTCLIVIMSWVSFWIKPEAAPARVTLGVTS 283
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 25.4 bits (53), Expect = 0.51
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 629 VWATISCLFFGTSNGIITTVSSTC-AFSLSS 540
+W ++FGT N T +++ C A SLS+
Sbjct: 718 IWLAFVPIYFGTGNAHETQITTLCVAISLSA 748
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 25.4 bits (53), Expect = 0.51
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 629 VWATISCLFFGTSNGIITTVSSTC-AFSLSS 540
+W ++FGT N T +++ C A SLS+
Sbjct: 808 IWLAFVPIYFGTGNAHETQITTLCVAISLSA 838
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 25.0 bits (52), Expect = 0.67
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 247 HHVQNHRQQLYDPAIMLHNLRKKTRSLQRRK 339
HH+QNH L A+ H+ + + Q+++
Sbjct: 142 HHLQNHHHHLQSTAVQDHHRPYQQQQQQQQR 172
Score = 23.8 bits (49), Expect = 1.5
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +1
Query: 133 HRRVQNASHHHTRSAVVGTQWPKKDSR*YVVHHRPAHDHHVQNHRQQ 273
H +QN HHH +S V +D HHRP Q RQQ
Sbjct: 141 HHHLQN-HHHHLQSTAV------QD------HHRPYQQQQQQQQRQQ 174
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 24.6 bits (51), Expect = 0.88
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = -1
Query: 629 VWATISCLFFGTSNGI---ITTVSSTCAFSLS 543
+W L+FGT N + IT++S T + S S
Sbjct: 860 IWLAFVPLYFGTGNNVALRITSMSVTISLSAS 891
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -1
Query: 191 WVPTTALRVWWWLAFWTRRW*LFARACVGV 102
++P+ + + W++FW R AR +GV
Sbjct: 228 YIPSGLIVIISWVSFWLNRNATPARVALGV 257
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -1
Query: 191 WVPTTALRVWWWLAFWTRRW*LFARACVGV 102
++P+ + + W++FW R AR +GV
Sbjct: 228 YIPSGLIVIISWVSFWLNRNATPARVALGV 257
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -1
Query: 191 WVPTTALRVWWWLAFWTRRW*LFARACVGV 102
++P+ + + W++FW R AR +GV
Sbjct: 167 YIPSGLIVIISWVSFWLNRNATPARVALGV 196
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 221 TYYLESFLGHWVPTTALRVWWWLAFWTRRW*LFARACVGV 102
+YYL ++P L + W++FW + + AR +GV
Sbjct: 242 SYYLIQI---YIPCCMLVIVSWVSFWLDQSAVPARVSLGV 278
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 221 TYYLESFLGHWVPTTALRVWWWLAFWTRRW*LFARACVGV 102
+YYL ++P L + W++FW + + AR +GV
Sbjct: 242 SYYLIQI---YIPCCMLVIVSWVSFWLDQSAVPARVSLGV 278
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 22.2 bits (45), Expect = 4.7
Identities = 9/36 (25%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 430 PTWSRLCPHPALVVSQPLCV-SHILSILLDGIFDVV 326
P+W P P ++ +PL I S+++ G +++
Sbjct: 29 PSWDGKMPQPCILKPKPLWTGKQISSLIIPGNVNMI 64
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 4.7
Identities = 7/31 (22%), Positives = 14/31 (45%)
Frame = +1
Query: 73 SICHRIWSDMTPTHALANNYHRRVQNASHHH 165
++ + ++S P H + H + HHH
Sbjct: 403 NLLNNVYSTPGPHHHTMGHGHSHIHATPHHH 433
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 519 EKSGYRLTGERECAR 563
+++ YR GER C+R
Sbjct: 241 DRNSYRNDGERSCSR 255
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 519 EKSGYRLTGERECAR 563
+++ YR GER C+R
Sbjct: 241 DRNSYRNDGERSCSR 255
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 519 EKSGYRLTGERECAR 563
+++ YR GER C+R
Sbjct: 241 DRNSYRNDGERSCSR 255
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 519 EKSGYRLTGERECAR 563
+++ YR GER C+R
Sbjct: 241 DRNSYRNDGERSCSR 255
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 519 EKSGYRLTGERECAR 563
+++ YR GER C+R
Sbjct: 241 DRNSYRNDGERSCSR 255
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 519 EKSGYRLTGERECAR 563
+++ YR GER C+R
Sbjct: 241 DRNSYRNDGERSCSR 255
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 519 EKSGYRLTGERECAR 563
+++ YR GER C+R
Sbjct: 241 DRNSYRNDGERSCSR 255
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 21.4 bits (43), Expect = 8.2
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = -1
Query: 191 WVPTTALRVWWWLAFWTRR 135
+VP + V W++FW R
Sbjct: 252 YVPCVLIVVLSWVSFWIHR 270
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 346 LVVCLKCVIHIRAVTQPTLDADRVATT 426
L+ CL C + T+P+ +D + T
Sbjct: 10 LITCLICSPSVHCGTRPSFVSDEMIAT 36
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 21.4 bits (43), Expect = 8.2
Identities = 6/24 (25%), Positives = 11/24 (45%)
Frame = -1
Query: 224 TTYYLESFLGHWVPTTALRVWWWL 153
T + F W P + +W+W+
Sbjct: 262 TVIIIAVFFICWTPYYVMSLWYWI 285
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,900
Number of Sequences: 438
Number of extensions: 4109
Number of successful extensions: 38
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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