Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3i20
         (739 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160939-1|AAD46879.1|  422|Drosophila melanogaster BcDNA.LD1893...   175   7e-44
AF145309-1|AAF08390.1|  422|Drosophila melanogaster 26S proteaso...   175   7e-44
AE013599-1944|AAF58212.1|  422|Drosophila melanogaster CG10149-P...   175   7e-44
AE013599-1943|AAF58213.2|  439|Drosophila melanogaster CG10149-P...   175   7e-44

>AF160939-1|AAD46879.1|  422|Drosophila melanogaster BcDNA.LD18931
           protein.
          Length = 422

 Score =  175 bits (425), Expect = 7e-44
 Identities = 91/144 (63%), Positives = 104/144 (72%), Gaps = 1/144 (0%)
 Frame = +2

Query: 275 MAGAMLFERSRVSSSTNRDE-DVRMTDKMVSTGELPEDDEENIRAKEQGILNXXXXXXXX 451
           MAGA LFER++  SS NR+E D  + +K+V   E  E+DEE IR KEQGIL         
Sbjct: 1   MAGATLFERAQALSSVNREEQDSSLLNKLVRDQEGAENDEERIRIKEQGILQQGELYKQE 60

Query: 452 XXXXXXXXXXXXTRPFLSLISKAKAAKLVRSLVDFFLDLEAGIGIEVQLCKECIEWAKEE 631
                       TRPFLS ISKAKAAKLVRSLVD FLD++AG GIEVQLCK+CIEWAK+E
Sbjct: 61  GKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQE 120

Query: 632 RRTFLRQSLEARLIALYFDTGMYT 703
           +RTFLRQSLEARLIALYFDT +YT
Sbjct: 121 KRTFLRQSLEARLIALYFDTALYT 144


>AF145309-1|AAF08390.1|  422|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p42B protein.
          Length = 422

 Score =  175 bits (425), Expect = 7e-44
 Identities = 91/144 (63%), Positives = 104/144 (72%), Gaps = 1/144 (0%)
 Frame = +2

Query: 275 MAGAMLFERSRVSSSTNRDE-DVRMTDKMVSTGELPEDDEENIRAKEQGILNXXXXXXXX 451
           MAGA LFER++  SS NR+E D  + +K+V   E  E+DEE IR KEQGIL         
Sbjct: 1   MAGATLFERAQALSSVNREEQDSSLLNKLVRDQEGAENDEERIRIKEQGILQQGELYKQE 60

Query: 452 XXXXXXXXXXXXTRPFLSLISKAKAAKLVRSLVDFFLDLEAGIGIEVQLCKECIEWAKEE 631
                       TRPFLS ISKAKAAKLVRSLVD FLD++AG GIEVQLCK+CIEWAK+E
Sbjct: 61  GKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQE 120

Query: 632 RRTFLRQSLEARLIALYFDTGMYT 703
           +RTFLRQSLEARLIALYFDT +YT
Sbjct: 121 KRTFLRQSLEARLIALYFDTALYT 144


>AE013599-1944|AAF58212.1|  422|Drosophila melanogaster CG10149-PB,
           isoform B protein.
          Length = 422

 Score =  175 bits (425), Expect = 7e-44
 Identities = 91/144 (63%), Positives = 104/144 (72%), Gaps = 1/144 (0%)
 Frame = +2

Query: 275 MAGAMLFERSRVSSSTNRDE-DVRMTDKMVSTGELPEDDEENIRAKEQGILNXXXXXXXX 451
           MAGA LFER++  SS NR+E D  + +K+V   E  E+DEE IR KEQGIL         
Sbjct: 1   MAGATLFERAQALSSVNREEQDSSLLNKLVRDQEGAENDEERIRIKEQGILQQGELYKQE 60

Query: 452 XXXXXXXXXXXXTRPFLSLISKAKAAKLVRSLVDFFLDLEAGIGIEVQLCKECIEWAKEE 631
                       TRPFLS ISKAKAAKLVRSLVD FLD++AG GIEVQLCK+CIEWAK+E
Sbjct: 61  GKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQE 120

Query: 632 RRTFLRQSLEARLIALYFDTGMYT 703
           +RTFLRQSLEARLIALYFDT +YT
Sbjct: 121 KRTFLRQSLEARLIALYFDTALYT 144


>AE013599-1943|AAF58213.2|  439|Drosophila melanogaster CG10149-PA,
           isoform A protein.
          Length = 439

 Score =  175 bits (425), Expect = 7e-44
 Identities = 91/144 (63%), Positives = 104/144 (72%), Gaps = 1/144 (0%)
 Frame = +2

Query: 275 MAGAMLFERSRVSSSTNRDE-DVRMTDKMVSTGELPEDDEENIRAKEQGILNXXXXXXXX 451
           MAGA LFER++  SS NR+E D  + +K+V   E  E+DEE IR KEQGIL         
Sbjct: 18  MAGATLFERAQALSSVNREEQDSSLLNKLVRDQEGAENDEERIRIKEQGILQQGELYKQE 77

Query: 452 XXXXXXXXXXXXTRPFLSLISKAKAAKLVRSLVDFFLDLEAGIGIEVQLCKECIEWAKEE 631
                       TRPFLS ISKAKAAKLVRSLVD FLD++AG GIEVQLCK+CIEWAK+E
Sbjct: 78  GKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQE 137

Query: 632 RRTFLRQSLEARLIALYFDTGMYT 703
           +RTFLRQSLEARLIALYFDT +YT
Sbjct: 138 KRTFLRQSLEARLIALYFDTALYT 161


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,644,346
Number of Sequences: 53049
Number of extensions: 706560
Number of successful extensions: 1947
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1939
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)