Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3i17
(721 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1095 - 24278295-24278741,24279066-24279307,24279647-242797... 31 1.2
04_01_0622 - 8175226-8175312,8175674-8175763,8176370-8176457,817... 31 1.2
04_01_0282 - 3764110-3764666,3765117-3765180 31 1.2
11_04_0051 + 12863978-12864476,12864575-12864674,12865567-128656... 30 1.6
06_03_1285 - 28993305-28993442,28993559-28993798,28993881-289939... 30 1.6
02_02_0557 + 11470259-11472307 30 2.1
06_03_0002 - 15280292-15281550,15282714-15282840 29 2.8
06_02_0208 - 13026296-13026654,13027394-13027497,13028109-130282... 29 3.7
12_01_0173 - 1292164-1293036,1294063-1294098,1294195-1294334,129... 29 4.9
08_01_0516 - 4499797-4499949,4500040-4500617,4500699-4500756,450... 29 4.9
02_05_0451 + 29123899-29123906,29124564-29124834,29125107-291252... 29 4.9
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 28 6.5
11_01_0172 - 1383568-1384440,1385336-1385401,1385470-1385505,138... 28 6.5
12_01_0151 - 1158834-1159703,1159917-1160092,1160144-1162097,116... 28 8.6
10_07_0028 + 12019827-12020000,12020083-12020505,12020583-120206... 28 8.6
09_04_0142 + 15039745-15040538,15041094-15041218,15041842-150421... 28 8.6
09_03_0156 - 12844549-12845138,12845237-12845723 28 8.6
07_03_0249 - 15816515-15816868,15817749-15817958,15818051-158182... 28 8.6
>08_02_1095 -
24278295-24278741,24279066-24279307,24279647-24279731,
24279783-24280004
Length = 331
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 503 NQLFWQCEVARPPFLRAWAYSSTAAGLW 420
N++ W+C R F W + +T AG+W
Sbjct: 175 NRISWRCPGRRCAFRNDWCWPATVAGVW 202
>04_01_0622 -
8175226-8175312,8175674-8175763,8176370-8176457,
8177021-8177095,8177754-8177821,8177898-8177955,
8178862-8178942,8179968-8180038,8180144-8180225,
8182327-8182449,8183023-8183129,8183201-8183263,
8183877-8183936,8184100-8184151,8185566-8185598,
8185820-8185871,8185965-8186028,8186693-8186749,
8186962-8187006,8187083-8187190,8188147-8188212,
8188382-8188492,8190841-8191035,8191419-8191499,
8191591-8191630,8191764-8191816
Length = 669
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/87 (26%), Positives = 36/87 (41%)
Frame = +2
Query: 422 IDLLPLRNTPMPEEKAAEPLHTAKIIGFPKVIVLDEAAIAAASIIPDQDLFSGSTMFLNP 601
+D PL + E+ + L+ K I K +V+D S+I L L
Sbjct: 7 LDNAPLNLAALREQSQKDLLNILKSIRGKKCVVIDPKLAGTLSLILQTSLLKEYGAELRL 66
Query: 602 VSAEQVIRECGLITVD*RSRLSRFEIV 682
+SAE + EC I RS L +++
Sbjct: 67 LSAEPLQTECAKILYLVRSELKFMKLI 93
>04_01_0282 - 3764110-3764666,3765117-3765180
Length = 206
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -3
Query: 278 ISTDRSRIQSALRSPGALVQSVQDKYTGASSPLAIPHPPSLLSRPVRHQA 129
++T S + A R P L D G SPL +P P LL PVR +A
Sbjct: 72 LTTTSSGLYRARRRPRRLRVGDNDDL-GGGSPLLLPRPAPLLPWPVRRRA 120
>11_04_0051 +
12863978-12864476,12864575-12864674,12865567-12865657,
12866114-12866176,12866364-12866549,12866994-12867024,
12867054-12867502
Length = 472
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 455 PEEKAAEPLHTAKIIGFPKVIVLDEAAIAAA 547
P +A H AKI GF KV +EAA+ AA
Sbjct: 388 PRNRAKSAHHAAKITGFGKVTPRNEAALQAA 418
>06_03_1285 -
28993305-28993442,28993559-28993798,28993881-28993961,
28994370-28994429,28994523-28994628,28994861-28994921,
28995198-28995246,28995475-28995599,28995809-28995947,
28996432-28996503,28996615-28996742,28997037-28997136,
28997757-28997897,28998116-28998232,28998505-28998609,
28999037-28999153
Length = 592
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 255 YPGSISGYLIVSRSIKPTTNAGRIPFDTISP 347
YPG ++ Y+ +R + + AG+ P+D SP
Sbjct: 82 YPGGLASYIQNARKLLADSKAGKNPYDGFSP 112
>02_02_0557 + 11470259-11472307
Length = 682
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -1
Query: 676 LETRKTRSSIDSDQTAFPDHLLCGDWIQEHCASTEQIL 563
LE R ++ D P LL DW+ EHC S EQIL
Sbjct: 560 LEVTSGRRPVEQDIEGHP--LLLTDWVFEHC-SNEQIL 594
>06_03_0002 - 15280292-15281550,15282714-15282840
Length = 461
Score = 29.5 bits (63), Expect = 2.8
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -3
Query: 248 ALRSPGALVQSVQDKYTGASSPLAIPHPPS-LLS--RPVRHQAPSH*PLRPA*SLRATPN 78
+LRSP + VQ++ + P PPS LLS RP R A L P + PN
Sbjct: 69 SLRSPNPRLLMVQEEPNITTPDAGHPSPPSRLLSKHRPRRGAAAPRASLHPPAPPHSQPN 128
Query: 77 WRSRCHC 57
+ CHC
Sbjct: 129 -LNLCHC 134
>06_02_0208 -
13026296-13026654,13027394-13027497,13028109-13028200,
13028418-13028774,13029932-13030109,13030454-13030507,
13030701-13030784,13031521-13031714
Length = 473
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Frame = -3
Query: 173 PHPPSLLSRPVRHQAPSH*PL-------RPA*SLRATPNWRSRCHCRCSSTICV 33
P P + PV+ Q P+ P +P +++TP+ + + HC C ++ C+
Sbjct: 38 PQPQQKPAAPVQPQMPTPRPWPVAFIPPKPVAEIKSTPSTKRKKHCNCKNSQCL 91
>12_01_0173 -
1292164-1293036,1294063-1294098,1294195-1294334,
1295592-1295748,1295862-1296035,1296146-1296396,
1299446-1299590
Length = 591
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = -3
Query: 284 DQISTDRSRIQSALRSPGALVQSVQDKYTGASSPLAIPHPPSLLSRPVRHQA-----PSH 120
+Q+ R++ + A++ L ++ + +SSPL + PP + +++ A P
Sbjct: 298 NQLLVARAKAEHAMQLKQRLGSALNNGAGSSSSPLMVTLPPGQTAAMMQNSAAMPIFPQF 357
Query: 119 *PLRPA*SLRAT 84
PL PA SL AT
Sbjct: 358 QPLHPATSLPAT 369
>08_01_0516 -
4499797-4499949,4500040-4500617,4500699-4500756,
4500855-4500932,4501032-4501091,4501219-4501332,
4501436-4501594
Length = 399
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 86 WLLNFRLDEVVNVRVPDDEPVVKEAKVDVE 175
W+ FR EV+ V P EP+ + DV+
Sbjct: 236 WIAGFRPSEVIRVLAPQLEPMTERQAADVQ 265
>02_05_0451 +
29123899-29123906,29124564-29124834,29125107-29125265,
29125439-29125543
Length = 180
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 470 PPFLRAWAYSSTAAGLWR*R-PETTDDRPPA 381
PP+ +AW + S AA +W R PE+ +DR A
Sbjct: 122 PPYCQAWVHGS-AAMMWNVRNPESKEDRVDA 151
>11_01_0298 -
2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +2
Query: 248 LTVSGIYQWISDRFPFYKAND-ERWKNSVRHNLSINPHFRKGARAPQGAGHLWSLAANAI 424
L+ + +Q + ++F AN+ E ++ + ++ +R GA P G + + + +
Sbjct: 728 LSQTNAHQVMDNQFTLCSANNNEAFRQTPLAKTYVDNAYRNGAFGPSGTSSISHQSMSMV 787
Query: 425 DLLPLRNTPMPEEKAAEP-LHTAKIIG 502
++P R P P L +IG
Sbjct: 788 TVMPNRTQAQPAHGLIRPDLSCGSVIG 814
>11_01_0172 -
1383568-1384440,1385336-1385401,1385470-1385505,
1385604-1385743,1386978-1387134,1387245-1387418,
1387540-1387790,1390296-1390446
Length = 615
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = -3
Query: 278 ISTDRSRIQSALRSPGALVQSVQDKYTGASSPLAIPHPPSLLSRPVRHQA-----PSH*P 114
+ R++ + A++ L ++ + +SSPL + PP + +++ A P + P
Sbjct: 324 VKVARAKAEHAMQLKQRLGSALNNGAGSSSSPLMVTLPPGQTAAMMQNSAAMPIFPHYQP 383
Query: 113 LRPA*SLRAT 84
L PA SL AT
Sbjct: 384 LHPATSLPAT 393
>12_01_0151 - 1158834-1159703,1159917-1160092,1160144-1162097,
1162360-1162620,1162729-1162916,1164127-1164166
Length = 1162
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 374 RAPQGAGHLWSLAANAIDLLPLRNTPMPEEKAAEPLHTAKIIGFPKVIVLDEA 532
+ P+G G L SL I++LP+ T + + L ++ P + VL E+
Sbjct: 1043 KLPEGLGMLGSLEDLMINILPVLTTLLESMQGLTSLRHINLMSCPMLTVLPES 1095
>10_07_0028 +
12019827-12020000,12020083-12020505,12020583-12020642,
12020709-12020822,12020903-12020908
Length = 258
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -3
Query: 206 KYTGASSPLAIPHPPSLLSRPVRHQAPSH*PLRP 105
K + +SP IP PP S PV+ ++ H P P
Sbjct: 207 KKSAVASPKPIPPPPRPPSPPVQSESSDHTPSAP 240
>09_04_0142 +
15039745-15040538,15041094-15041218,15041842-15042137,
15042267-15042554,15042834-15043193
Length = 620
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 526 RGCHSSSKHYSRSRFVQWKHNVPESSLRRASDQGMRS 636
RGC SSS Y R+ FV+ + E D+ +RS
Sbjct: 295 RGCWSSSSSYPRNEFVKTNTDYIEKGEYSGGDRPVRS 331
>09_03_0156 - 12844549-12845138,12845237-12845723
Length = 358
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 455 PEEKAAEPLHTAKIIGFPKVIVLDEAAIAAA 547
P +A H AKI GF KV +EAA+ AA
Sbjct: 235 PCNRAKSAHHAAKITGFGKVPPRNEAALQAA 265
>07_03_0249 -
15816515-15816868,15817749-15817958,15818051-15818245,
15818318-15818393,15819982-15820021,15820155-15820283,
15820363-15820405
Length = 348
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 347 WRDCVERNSSSVRRWLYRTGNDQISTDRSRIQSALRSP 234
+R RN R +R +D + DRSR++S RSP
Sbjct: 304 YRSSSYRNGRDSERDRHRYRSDDMRKDRSRVRSRSRSP 341
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,803,053
Number of Sequences: 37544
Number of extensions: 523856
Number of successful extensions: 1609
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1609
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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