Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3i14
         (279 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   0.70 
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   0.70 
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   0.70 
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            21   2.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   3.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   6.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    19   8.6  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    19   8.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    19   8.6  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 0.70
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -2

Query: 206 YFTICIIYVCQKSTAPLLKITKMPKALTI 120
           +  +C+  VCQ +T  +L+   + K+L I
Sbjct: 5   FMLVCLGIVCQGTTGNILRGESLNKSLPI 33


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 0.70
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -2

Query: 206 YFTICIIYVCQKSTAPLLKITKMPKALTI 120
           +  +C+  VCQ +T  +L+   + K+L I
Sbjct: 5   FMLVCLGIVCQGTTGNILRGESLNKSLPI 33


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 0.70
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -2

Query: 206 YFTICIIYVCQKSTAPLLKITKMPKALTI 120
           +  +C+  VCQ +T  +L+   + K+L I
Sbjct: 5   FMLVCLGIVCQGTTGNILRGESLNKSLPI 33


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 5/18 (27%), Positives = 13/18 (72%)
 Frame = -1

Query: 234 LNPKANNTGLFYYLYNIC 181
           + PK +N  +++ +Y++C
Sbjct: 29  IKPKDHNGSIYWSMYHLC 46


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 8/34 (23%), Positives = 19/34 (55%)
 Frame = -2

Query: 242 YNDLILKQIIQAYFTICIIYVCQKSTAPLLKITK 141
           Y++++LK + +     CII+   +  A +++  K
Sbjct: 329 YDNIVLKLLTKPRARGCIIFGSDQEVAGVMRAVK 362


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 161 PLLKITKMPKALTIEIYNQSTKYIT*N 81
           P  +    P+ LT+   +QST +++ N
Sbjct: 313 PCTQPPSAPQNLTVNFVDQSTVFLSWN 339


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 140 MPKALTIEIYNQSTKYIT*NIIYCNSQ 60
           M    T+++YN      T N+I  + Q
Sbjct: 170 MSGTATLDVYNADIMAATSNVIIASMQ 196


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 221 QIIQAYFTICIIYV 180
           +I +A  TIC +YV
Sbjct: 271 RIAKAAITICFLYV 284


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 140 MPKALTIEIYNQSTKYIT*NIIYCNSQ 60
           M    T+++YN      T N+I  + Q
Sbjct: 170 MSGTATLDVYNADIMAATSNVIIASMQ 196


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,875
Number of Sequences: 438
Number of extensions: 1209
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5369883
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)