Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3i07
         (565 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7NK27 Cluster: Gll1653 protein; n=1; Gloeobacter viola...    35   1.5  
UniRef50_Q3E041 Cluster: Transcription-repair coupling factor; n...    34   2.0  
UniRef50_Q47JJ9 Cluster: Sensor protein; n=1; Dechloromonas arom...    34   2.6  
UniRef50_A1ZT33 Cluster: Serine/threonine protein kinases, putat...    34   2.6  
UniRef50_A2TYJ4 Cluster: Putative uncharacterized protein; n=2; ...    33   3.5  
UniRef50_Q5B6T7 Cluster: Putative uncharacterized protein; n=1; ...    33   4.6  
UniRef50_Q6L129 Cluster: Putative uncharacterized protein; n=1; ...    33   4.6  

>UniRef50_Q7NK27 Cluster: Gll1653 protein; n=1; Gloeobacter
           violaceus|Rep: Gll1653 protein - Gloeobacter violaceus
          Length = 408

 Score = 34.7 bits (76), Expect = 1.5
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 195 LANKMEPGHSKLGHHVPH*KPWDQK 121
           LA K+EPGH K GHH    K WD +
Sbjct: 119 LAAKVEPGHQKTGHHRQARKKWDAR 143


>UniRef50_Q3E041 Cluster: Transcription-repair coupling factor; n=2;
           Chloroflexus|Rep: Transcription-repair coupling factor -
           Chloroflexus aurantiacus J-10-fl
          Length = 1185

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +1

Query: 292 MVENVLTVSQATDATLEVERGRQAAAVKVCVELLDASTEHYEQLALLRD--ELQKRNVMK 465
           +++  L  S   +AT+ ++RG Q +  +  V LLD     Y+++A++ +  EL +R  + 
Sbjct: 138 LMQPTLPPSDLANATIRLQRGMQVSIEETVVTLLD---NGYQRVAMVEEPGELSRRGAIL 194

Query: 466 RQYPPAIEL 492
             +PP  EL
Sbjct: 195 DVWPPGDEL 203


>UniRef50_Q47JJ9 Cluster: Sensor protein; n=1; Dechloromonas
           aromatica RCB|Rep: Sensor protein - Dechloromonas
           aromatica (strain RCB)
          Length = 1214

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 19/63 (30%), Positives = 27/63 (42%)
 Frame = +1

Query: 145 WNVVPKFRVTRFHFVSQDVTWLQINAGIITVLTIFFCLYLEIRKRKLDDMVENVLTVSQA 324
           W V     V  F  +S  + WL I  G+    TIF  + + +RK  L+ +   VL    A
Sbjct: 459 WTVAGGTSVDEFTALSDRIVWLVIAGGLAMATTIFVIILILLRKLILNPLNSQVLPTFHA 518

Query: 325 TDA 333
             A
Sbjct: 519 ISA 521


>UniRef50_A1ZT33 Cluster: Serine/threonine protein kinases, putative;
            n=1; Microscilla marina ATCC 23134|Rep: Serine/threonine
            protein kinases, putative - Microscilla marina ATCC 23134
          Length = 1306

 Score = 33.9 bits (74), Expect = 2.6
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
 Frame = +1

Query: 205  WLQINAGIITVLTIFFCLYLEIR-----KRKLDDMV-ENVLTVSQATDATLEVERGRQAA 366
            W  +  G+I  L I+  ++L IR     K  L+ +V E  L + Q  +ATL+ ++   + 
Sbjct: 788  WAYLLFGVIGALVIWGIVHLNIRRLSHQKAHLEQVVNERTLEIRQK-NATLQTQKSEISE 846

Query: 367  AVKVCVELLDASTEHYEQLALLRDELQK 450
              K   E  D   E  E++ + RD+L +
Sbjct: 847  QAKSLAEQADFLQEANEEIVMQRDQLDQ 874


>UniRef50_A2TYJ4 Cluster: Putative uncharacterized protein; n=2;
           Polaribacter|Rep: Putative uncharacterized protein -
           Polaribacter dokdonensis MED152
          Length = 235

 Score = 33.5 bits (73), Expect = 3.5
 Identities = 15/56 (26%), Positives = 31/56 (55%)
 Frame = +1

Query: 133 GFSVWNVVPKFRVTRFHFVSQDVTWLQINAGIITVLTIFFCLYLEIRKRKLDDMVE 300
           GF+  N+     +T F F   ++ WL + A  +T+L IFF +   +  +K +++++
Sbjct: 168 GFTFINLFNFINLTEFDFSGLNIYWLLLVAATVTLLFIFFYVANYVLPQKAEELLQ 223


>UniRef50_Q5B6T7 Cluster: Putative uncharacterized protein; n=1;
            Emericella nidulans|Rep: Putative uncharacterized protein
            - Emericella nidulans (Aspergillus nidulans)
          Length = 1202

 Score = 33.1 bits (72), Expect = 4.6
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = +1

Query: 301  NVLTVSQATDATLEVERGRQAAAVKVCVELLDASTEHYEQLALLRDELQKRNVMKRQ 471
            +V+  SQ  D +L     R A+ + +    L+   EH E+L    D+ +KRN  +++
Sbjct: 1138 DVIPASQLYDISLPTPAVRPASTLGIAARKLETDPEHRERLRKALDDAKKRNAARQR 1194


>UniRef50_Q6L129 Cluster: Putative uncharacterized protein; n=1;
           Picrophilus torridus|Rep: Putative uncharacterized
           protein - Picrophilus torridus
          Length = 150

 Score = 33.1 bits (72), Expect = 4.6
 Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +1

Query: 337 LEVERGRQAAAVKVCVELLDASTEH-YEQLALLRDELQK 450
           L V  G +   +K C+++LD  T+H Y++  +L+D ++K
Sbjct: 34  LAVSEGSKVPEIKECIDILDVLTQHLYDKNVVLKDSVRK 72


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,808,258
Number of Sequences: 1657284
Number of extensions: 10841948
Number of successful extensions: 30044
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30033
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)