Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3h24
(706 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 131 8e-32
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 81 1e-16
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 59 7e-10
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 44 2e-05
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 39 6e-04
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 37 0.002
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 36 0.007
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 34 0.023
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.65
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 28 1.1
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 28 1.5
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.5
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 28 1.5
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 2.6
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 27 3.5
SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 4.6
SPAC6F6.11c |||pyridoxine-pyridoxal-pyridoxamine kinase |Schizos... 26 6.0
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 8.0
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 25 8.0
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 131 bits (317), Expect = 8e-32
Identities = 68/181 (37%), Positives = 107/181 (59%), Gaps = 1/181 (0%)
Frame = +1
Query: 127 YLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPP 306
+ C +AE V + + +++ +V FYAPWCGHCK L PEY AA L+ D
Sbjct: 17 FFCASAE--VPKVNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADELEKD--G 72
Query: 307 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSS 486
++L +VDCTE G C ++S+ GYPTL +F+ G+ S+Y+GPR+ + +VKYMR Q+ P+
Sbjct: 73 ISLVEVDCTEEG-DLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQLLPTV 131
Query: 487 KELLTVADFEAFTSK-DEVVVVGFFEKESDLKGEFLKTADKLREEVTFAHSSANEVLEKT 663
K ++ E F K D++ VV FF K+ L + + A+ ++++ FA S E+ +
Sbjct: 132 KP-ISKDTLENFVEKADDLAVVAFF-KDQKLNDTYTEVAEVMKDDFVFAASDDKELAKSL 189
Query: 664 G 666
G
Sbjct: 190 G 190
Score = 66.1 bits (154), Expect = 5e-12
Identities = 42/122 (34%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Frame = +1
Query: 142 AEEDVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALA 318
++ED++ L +F V+ + LV FYAPWCGHCK L P Y A D V +A
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDD-SNVVVA 411
Query: 319 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSS--EYNGPRESNGIVKYM--RAQVGPSS 486
K+D TE S S+SG+PT+ F+ + + Y G R + ++ A P
Sbjct: 412 KIDATENDISV----SISGFPTIMFFKANDKVNPVRYEGDRTLEDLSAFIDKHASFEPIK 467
Query: 487 KE 492
KE
Sbjct: 468 KE 469
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 81.4 bits (192), Expect = 1e-16
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Frame = +1
Query: 64 KAPAKFKMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGH 243
+ P F +F + F L+ G+ + ++L +F + +LV+FYAPWCG+
Sbjct: 4 RIPTLFTLFLAC-FSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGY 62
Query: 244 CKRLKPEYAVAAGLLKTDVPPVALAKVDC-TEGGKSTCEQFSVSGYPTLKIF---RKGE- 408
CK+L P Y A L + +P A VDC + ++ C Q+ V G+PT+K+ KG
Sbjct: 63 CKKLVPTYQKLASNLHSLLPVTA---VDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSS 119
Query: 409 -LSSEYNGPRESNGIVKYMRAQVGPSSKELLT 501
S++YNG R + K++ + PS ++LT
Sbjct: 120 LSSTDYNGDRSYKSLQKFVSDSI-PSKVKILT 150
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 58.8 bits (136), Expect = 7e-10
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Frame = +1
Query: 151 DVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVD 327
+V++L +F V+ LV FYA WCG+CKRL P Y + K + P V + K++
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNE-PNVEIVKIN 199
Query: 328 CTEGGKSTCEQFSVSGYPTLKIFRKGELSSE--YNGPRESNGIVKYMRAQVG 477
+ V+ +PT+K F K + Y G R +++Y+ + G
Sbjct: 200 -ADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSG 250
Score = 58.0 bits (134), Expect = 1e-09
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +1
Query: 208 ALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTL 387
AL+ FYA WCGHCK L P Y G L D V + K+D + +++ ++G+PTL
Sbjct: 42 ALIEFYATWCGHCKSLAPVYE-ELGALFEDHNDVLIGKID-ADTHSDVADKYHITGFPTL 99
Query: 388 KIF-RKGELSSEYNGPRESNGIVKYMRAQVGPSSKELL 498
F G +Y+ R+ + + +++ + G ++++
Sbjct: 100 IWFPPDGSEPVQYSNARDVDSLTQFVSEKTGIKKRKIV 137
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 44.0 bits (99), Expect = 2e-05
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
Frame = +1
Query: 163 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDV--PPVALAKVDCTE 336
LTD+D + +S+ T + +Y P CG CKRL P + K V +VDC++
Sbjct: 31 LTDNDLESEVSK-GTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSK 89
Query: 337 GGKSTCEQFSVSGYPTLKIFRKGELSSE--YNGPRESNGIVKYMRAQVGPSSKELLTVAD 510
S+C ++ PTL +++ GE+ E + ++ ++ + P + + +D
Sbjct: 90 -ELSSCA--NIRAVPTLYLYQNGEIVEEVPFGASTSEASLLDFVETHLNPDTDPDIP-SD 145
Query: 511 FEAFTSKD 534
+ T +D
Sbjct: 146 EDVLTDED 153
Score = 40.7 bits (91), Expect = 2e-04
Identities = 30/134 (22%), Positives = 58/134 (43%)
Frame = +1
Query: 169 DSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKS 348
D+D A L+ + + FY+ C C + + A ++ + +A ++C K
Sbjct: 288 DADIDAALTDKEGWFIQFYSSECDDCDDVSTAWYAMANRMRGKLN---VAHINCAVS-KR 343
Query: 349 TCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELLTVADFEAFTS 528
C+Q+S+ +PT +F K E EY G +V + +E+ + A +
Sbjct: 344 ACKQYSIQYFPTF-LFFKEEAFVEYVGLPNEGDLVSFAEEAANFEIREVELLDTVNAEKN 402
Query: 529 KDEVVVVGFFEKES 570
D V + F++ +S
Sbjct: 403 GD-VFFLYFYDDDS 415
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 39.1 bits (87), Expect = 6e-04
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +1
Query: 172 SDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKST 351
S+F +++ Q +V F+A WCG CK + P++ KVD + +
Sbjct: 9 SEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFE----QFSNTYSDATFIKVDVDQLSEIA 64
Query: 352 CEQFSVSGYPTLKIFRKGELSSEYNG 429
E V P+ +++ GE E G
Sbjct: 65 AEA-GVHAMPSFFLYKNGEKIEEIVG 89
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 37.1 bits (82), Expect = 0.002
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +1
Query: 175 DFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTC 354
D++ +S +V FYA WCG CK LKP L + V+ +
Sbjct: 27 DYNTRISADKVTVVDFYADWCGPCKYLKP----FLEKLSEQNQKASFIAVN-ADKFSDIA 81
Query: 355 EQFSVSGYPTLKIFRKGE 408
++ V PT+ +FRKG+
Sbjct: 82 QKNGVYALPTMVLFRKGQ 99
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 35.5 bits (78), Expect = 0.007
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +1
Query: 223 YAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRK 402
YA WCG CK + P ++ A K P AKV+ E + V PT F
Sbjct: 27 YADWCGPCKAISPLFSQLAS--KYASPKFVFAKVNVDE-QRQIASGLGVKAMPTFVFFEN 83
Query: 403 GE 408
G+
Sbjct: 84 GK 85
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 33.9 bits (74), Expect = 0.023
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Frame = -3
Query: 650 TSLADE*AKVTSSLNLSAVFRNSPFRSDSFSKNPTTTTSSLEVKASKSATVRSSLELGPT 471
TSL ++ +SS + S +S + S S +PT+++SS + +S S+ V SS G +
Sbjct: 81 TSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSSSGMS 140
Query: 470 WARMYLTMPLDSLGPLYSEES------SPFLNIFSVGYPD---------TENCSQVLLPP 336
+ + + + S Y S S +I S Y D T S+V+ P
Sbjct: 141 SSSLSHSSSVPSSSSSYHSSSMTTSGLSSSASIVSSTYRDGPSIITLVSTSYVSEVVTPT 200
Query: 335 SVQSTLASATGGTSVFNRPAATAYSGFSLL 246
+ + +S++ +S + P +++YS L
Sbjct: 201 TTNNWNSSSSFTSSTSSTPISSSYSSSGTL 230
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 29.1 bits (62), Expect = 0.65
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Frame = -3
Query: 602 SAVFRNSP-FRSDSFSKNPTTTTSSLEVKASKSATVRSSLELGPTWARMYLTMPLDSLGP 426
SA F +SP F S+S S PT+ SS+ S +++ ++L T + +T G
Sbjct: 447 SATFTSSPPFYSNS-SVIPTSAPSSVSSFTSSNSSYTTTL----TASNTTVTFTGTGTGS 501
Query: 425 LYSEESSPFLNIFSVGYPDTENCSQVLLPPSVQSTLASATGGTSVFN 285
+ SSP+ + S+ P T + S + S + S+ GTS +
Sbjct: 502 ATATSSSPYYSNSSIIVPTTVSTSGSVSSFSSSPSPTSSFSGTSALS 548
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 659 FSRTSLADE*AKVTSSLNLSAVFRNSPFRSDSFSKNPT 546
F+R SL + K ++ +L + N+P +SF K+PT
Sbjct: 366 FTRLSLYQQAPKKSNLPSLDVIASNNPLVEESFQKDPT 403
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 27.9 bits (59), Expect = 1.5
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Frame = -3
Query: 608 NLSAVFRNSPFRSDSFSKN---PTTTTSSLEVKASKSATVRSS-LELGPTWARMYLTMPL 441
N N PF+ S++ N P+ TT ++ S TV S L + +
Sbjct: 263 NFPTTVPNYPFQQPSYNPNALVPSYTTLVSQLPPSPCLTVSSGPLSTASSIPSNCSCPSV 322
Query: 440 DSLGPLYSEESSPFLNIFSVGYPDT 366
S GP Y E +N ++ G P T
Sbjct: 323 KSSGPSYHAEQEVNVNSYNGGIPST 347
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 1.5
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Frame = -3
Query: 620 TSSLNLSAVFRNSPFRSDSFSKNPTTTTSSLEVKA--SKSATVRSSLELGPTWARMYLTM 447
TSS LS+ S S S S + T T+SSL + S S++ S+ + +
Sbjct: 205 TSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTAS 264
Query: 446 PLDSLGPLYSEESSPFLNIFSVGYPDTENCSQVLLPPSVQSTLASATGGTSVFN 285
S + S SS + S + + S P S ST++S++ +S F+
Sbjct: 265 SSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFS 318
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = +1
Query: 211 LVMFYAPWCGHCKRLKPEYAVAAGLLKTDVPPVALAKVDCTEGGKSTCEQFSVSGYPTLK 390
L+ FYAPW CK++ + A D K++ E E F V+ P
Sbjct: 24 LLNFYAPWAAPCKQMNQVFDQFA----KDTKNAVFLKIE-AEKFSDIAESFDVNAVPLFV 78
Query: 391 IFRKGELSSEYNG 429
+ ++ + +G
Sbjct: 79 LIHGAKVLARISG 91
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -3
Query: 629 AKVTSSLNLSAVFRNSPFRSDSFSKNPTTTTSSLEVKASKSATVRSSLEL 480
A TSS S NS S S + +TTS+ +S S+TV SS L
Sbjct: 206 ATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPL 255
Score = 26.2 bits (55), Expect = 4.6
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Frame = -3
Query: 656 SRTSLADE*AKVTSSLNLSAVFRNSPFRSDSFSKNPTTTTSSLEVKASKSATVRSSLELG 477
S +SLA T+S + ++ S + S + +TT+SSL + S+++ SS
Sbjct: 87 SSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITS 146
Query: 476 PTWARMYLT-MPLDSLGPLYSEESSPFLNIFSVGYPDTENCSQVLLPPSVQSTLASATGG 300
+ A T L S + ++P + S T + S+L S T
Sbjct: 147 SSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSA 206
Query: 299 TSVFNRPAATAYS 261
T+ + ++TA S
Sbjct: 207 TATSSSLSSTAAS 219
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 26.6 bits (56), Expect = 3.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 155 FSILQIPTFRLFYLNMIQPWSCF 223
F LQ+ FR + N+++PW CF
Sbjct: 208 FYCLQLQMFRKMH-NIVRPWDCF 229
>SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 279
Score = 26.2 bits (55), Expect = 4.6
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Frame = +1
Query: 343 KSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELLTVADFE-- 516
KS E+ + Y LK+ + E + +YN P N + + + T +D E
Sbjct: 37 KSPLEKEIANEYEALKVTERKEDTQDYNEPELHNSNDPTVDLYADTYATQAATESDSELE 96
Query: 517 --AFTSKDEVVVVGFFEKESD-LKGEFLKT-ADKLREEVTF-AHSSANEVLEKTGYKNNV 681
F+ DE + E+ + LK EF + A K + + F + EV++ T V
Sbjct: 97 DALFSQLDEFDDTAYREQRLEMLKKEFARVEAAKEKGHMQFLTVENEREVMDFTLSSKKV 156
Query: 682 VLY 690
V++
Sbjct: 157 VIH 159
>SPAC6F6.11c |||pyridoxine-pyridoxal-pyridoxamine kinase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 601 DKLREEVTFAHSSANEVLEKT 663
DKL++ V A SS +EV++KT
Sbjct: 248 DKLKKSVEMALSSVHEVIQKT 268
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 652 ELHWLMNEQK*PPPLICQLFSGTLLSGQIPFRRI 551
E+ W +Q+ P P QLF ++ ++ FRRI
Sbjct: 3581 EVFWWSKQQRKPIPQGIQLFETVKVNVELLFRRI 3614
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.4 bits (53), Expect = 8.0
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 145 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKT 294
EE V+D+ + D +AVL L + +P+ CK P+ V A +L+T
Sbjct: 324 EEAVIDVDELDKNAVLFGGTRVLQVTQSPF---CKLKTPDNGVPAIVLRT 370
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,941,192
Number of Sequences: 5004
Number of extensions: 60416
Number of successful extensions: 218
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 327172622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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