Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3h21
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098997-5|AAC68717.1|  218|Caenorhabditis elegans Insulin relat...    29   4.3  
AC024214-7|AAF36078.2|  189|Caenorhabditis elegans Hypothetical ...    29   4.3  
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>AF098997-5|AAC68717.1|  218|Caenorhabditis elegans Insulin related
           protein 31 protein.
          Length = 218

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 10  FARNISTCIALLVHRNSKLRRSRNYTYK 93
           FAR   TC  LL+ R  ++  + NYTYK
Sbjct: 26  FARPEKTCGGLLIRRVDRICPNLNYTYK 53


>AC024214-7|AAF36078.2|  189|Caenorhabditis elegans Hypothetical
           protein Y77E11A.8 protein.
          Length = 189

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -3

Query: 362 TAYNYDYDYRDFL 324
           T YNYDYDY DF+
Sbjct: 44  TCYNYDYDYVDFV 56


>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
            T24B8.7b protein.
          Length = 2923

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 157  ERFEIFIEAFVMFVQMFRVEPSVGGYTSDLDE 252
            + FEI   +  M ++MF   P   G+TSDL+E
Sbjct: 1549 DSFEITCVSLKMLLEMFMSLPLHDGFTSDLNE 1580


>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
            T24B8.7a protein.
          Length = 2920

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 157  ERFEIFIEAFVMFVQMFRVEPSVGGYTSDLDE 252
            + FEI   +  M ++MF   P   G+TSDL+E
Sbjct: 1546 DSFEITCVSLKMLLEMFMSLPLHDGFTSDLNE 1577


>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
            T24B8.7b protein.
          Length = 2923

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 157  ERFEIFIEAFVMFVQMFRVEPSVGGYTSDLDE 252
            + FEI   +  M ++MF   P   G+TSDL+E
Sbjct: 1549 DSFEITCVSLKMLLEMFMSLPLHDGFTSDLNE 1580


>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
            T24B8.7a protein.
          Length = 2920

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 157  ERFEIFIEAFVMFVQMFRVEPSVGGYTSDLDE 252
            + FEI   +  M ++MF   P   G+TSDL+E
Sbjct: 1546 DSFEITCVSLKMLLEMFMSLPLHDGFTSDLNE 1577


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,253,452
Number of Sequences: 27780
Number of extensions: 273938
Number of successful extensions: 681
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)