Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3h16
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical ... 30 1.1
AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical ... 30 1.1
AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical ... 30 1.1
AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical ... 30 1.1
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 28 4.3
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical pr... 28 4.3
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 28 4.3
U80024-10|AAK18891.1| 297|Caenorhabditis elegans Serpentine rec... 28 4.3
U12966-6|AAM48533.1| 783|Caenorhabditis elegans Hypothetical pr... 28 4.3
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 28 4.3
Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical pr... 28 5.7
U40029-12|AAA81131.1| 785|Caenorhabditis elegans Temporarily as... 28 5.7
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 28 5.7
Z81029-2|CAB02696.1| 220|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical p... 27 7.5
Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81483-5|CAB03965.1| 104|Caenorhabditis elegans Hypothetical pr... 27 9.9
U13644-1|AAB52683.1| 437|Caenorhabditis elegans Hypothetical pr... 27 9.9
>AF077536-1|AAK31411.2| 643|Caenorhabditis elegans Hypothetical
protein C16A11.5 protein.
Length = 643
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Frame = +3
Query: 111 DVLEGFKTVQDVVDNMLTRLEELTSVLQMVKLKNGDCCNIVTEDIIKYRREINVLGKRIS 290
DV + KT Q+ + M ++ EL L + ++N + +D+ + E+N+L
Sbjct: 449 DVKKELKTSQNKENKMRKKVSELEKKLDVENVQNEQEVKEMEDDLRGKQEELNILRNDSL 508
Query: 291 TLSNVLM---FLSNNVDTVEKQVE--RAEGFFGVQNDNKLKSLLKPFIKRGRE 434
+ +VLM L +EK VE + E +N N +S L+ + RE
Sbjct: 509 KVHDVLMEIADLKQKHSKLEKHVEGLKEENLKQERNYNLTQSNLEANLSSMRE 561
>AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical
protein H06I04.3b protein.
Length = 716
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +3
Query: 234 TEDIIKYRREINVLGKRISTLSNVLMFLSNNVDTVEKQVERAEG 365
TE++I+Y ++ VLG R L +L + + ++T+E+Q + EG
Sbjct: 292 TEEVIEYMNDVKVLGPR--ELRVLLRWRKSMLETLEEQRKAVEG 333
>AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical
protein H06I04.3c protein.
Length = 786
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +3
Query: 234 TEDIIKYRREINVLGKRISTLSNVLMFLSNNVDTVEKQVERAEG 365
TE++I+Y ++ VLG R L +L + + ++T+E+Q + EG
Sbjct: 292 TEEVIEYMNDVKVLGPR--ELRVLLRWRKSMLETLEEQRKAVEG 333
>AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical
protein H06I04.3a protein.
Length = 833
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +3
Query: 234 TEDIIKYRREINVLGKRISTLSNVLMFLSNNVDTVEKQVERAEG 365
TE++I+Y ++ VLG R L +L + + ++T+E+Q + EG
Sbjct: 292 TEEVIEYMNDVKVLGPR--ELRVLLRWRKSMLETLEEQRKAVEG 333
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 305 YIGQGRNPFP*HIYLSTIFYYIFSHNIA-AIAVL*FNHLKNTRQ 177
Y+ NPF +YLS +FY+I +N + + + F H + +Q
Sbjct: 1128 YLVMQDNPFLPRLYLSGVFYFILMYNGSNVLPIARFLHYTHMKQ 1171
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 305 YIGQGRNPFP*HIYLSTIFYYIFSHNIA-AIAVL*FNHLKNTRQ 177
Y+ NPF +YLS +FY+I +N + + + F H + +Q
Sbjct: 1128 YLVMQDNPFLPRLYLSGVFYFILMYNGSNVLPIARFLHYTHMKQ 1171
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 339 EKQVERAEGFFGVQNDNKLKSLLKPFIKRGRETI 440
+ + ERA +G+ D LK+L+ P +K G E +
Sbjct: 376 QDEAERACNMYGIDVDQFLKALVSPRVKVGTEWV 409
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 339 EKQVERAEGFFGVQNDNKLKSLLKPFIKRGRETI 440
+ + ERA +G+ D LK+L+ P +K G E +
Sbjct: 376 QDEAERACNMYGIDVDQFLKALVSPRVKVGTEWV 409
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 351 ERAEGFFGVQNDNKLKSLLKPFIKRGRETI 440
ERA FG+ ++ LK+L +P +K G E +
Sbjct: 386 ERAAKCFGIDSEEFLKALTRPRVKVGNEWV 415
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 351 ERAEGFFGVQNDNKLKSLLKPFIKRGRETI 440
ERA FG+ ++ LK+L +P +K G E +
Sbjct: 386 ERAAKCFGIDSEEFLKALTRPRVKVGNEWV 415
>Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical
protein ZK938.3 protein.
Length = 660
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 400 LFNLLSFCTPKKPSALSTCFSTVSTLFDKNIN 305
LFN LS P S +S F T+S+LF +++
Sbjct: 12 LFNFLSTFNPSTISIISKFFETISSLFSGSLH 43
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain
2 protein.
Length = 1947
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 351 ERAEGFFGVQNDNKLKSLLKPFIKRGRETI 440
ERA FG+ ++ LK+L +P +K G E +
Sbjct: 386 ERAAKCFGIDSEEFLKALTRPRVKVGNEWV 415
>U80024-10|AAK18891.1| 297|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 11 protein.
Length = 297
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/83 (21%), Positives = 37/83 (44%)
Frame = -3
Query: 573 HLLFSIPTLVHCITFKT*THVTCFENCPLHYSNLFYDEEANYCQVLSPYLFL*MA*EDFL 394
HL ++ L+ I+ T ++ F++C L+ SN+ + C V + + + +
Sbjct: 131 HLCPTVIVLILAISLGTLENLVLFQSCTLNLSNIPKNCGVLRCAVDACFFSYWASDRSAM 190
Query: 393 ICYHFVLQKNLQLSLLVFQLYQH 325
+F+ L + L+ F QH
Sbjct: 191 FALNFIFSGLLSIKLIFFNKPQH 213
>U12966-6|AAM48533.1| 783|Caenorhabditis elegans Hypothetical
protein F54D8.6 protein.
Length = 783
Score = 28.3 bits (60), Expect = 4.3
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +3
Query: 129 KTVQDVVDNMLT--RLEELTSVLQMVKLKNGDCCNIVTEDIIKYRREINVLGKRI-STLS 299
K + DV+D M+T R++E + +++ K+ + N+VT DIIK +R I + K + + +S
Sbjct: 672 KNLGDVIDMMITIDRIKEQVDMDKIMIHKHME--NVVTMDIIKDKRIIMEVKKDMENIIS 729
Query: 300 NVLMFLSNNVDTVEKQVERAE 362
N + DT+ K + + E
Sbjct: 730 NTTV-----KDTINKDMGKME 745
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = -1
Query: 305 YIGQGRNPFP*HIYLSTIFYYIFSHNIA-AIAVL*FNHLKNTRQ 177
Y+ NPF +YLS +FY+I +N + + + F H + +Q
Sbjct: 1128 YLVMQDNPFLPRLYLSGVFYFILMYNGSNVLPIARFLHYTHMKQ 1171
>Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical
protein C17E4.2 protein.
Length = 819
Score = 27.9 bits (59), Expect = 5.7
Identities = 20/91 (21%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +3
Query: 141 DVVDNMLTRLEELTSVLQMVKLKNGDCCNIVTEDIIKYRREI-NVLGKRISTLSNVLMFL 317
D ++ ++ E ++ L++ +LK + + ++++ R ++LGK L+ +M L
Sbjct: 150 DSMNPKISVYENSSNTLELTQLKAEN--EFLKHELVEQRNIFESMLGKEKFDLTLEIMLL 207
Query: 318 SNNVDTVEKQVERAEGFFGVQNDNKLKSLLK 410
N V+ K+ + FF ++ K + +LK
Sbjct: 208 KNQVEESFKEKKMILAFFDEKDSEKEQMVLK 238
>U40029-12|AAA81131.1| 785|Caenorhabditis elegans Temporarily
assigned gene nameprotein 151 protein.
Length = 785
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 108 VDVLEGFKTVQDVVDNMLTRLEELTSVLQMVKLKNGDCCNIVTED 242
V VLE +K +++V L E SVL MV K+ C +T D
Sbjct: 540 VAVLEAYKDAKNLVLFQLLPHEHKMSVLNMVLKKHPSCTIPITSD 584
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 303 VLMFLSNNVDTVEKQVERAEGFFGVQN-DNKLKSLLKPFIKRGRETIPDNSLPPHHKIDL 479
++ FLS++ ++ +E +GFFG D+ +K + +K + + D+S + D+
Sbjct: 1990 LMTFLSSSPWILQNLLENLKGFFGAAAVDSMIKRIPANLLKSNKRHLIDSSFSSASRTDV 2049
Query: 480 SS 485
S
Sbjct: 2050 DS 2051
>Z81029-2|CAB02696.1| 220|Caenorhabditis elegans Hypothetical
protein C01A2.2 protein.
Length = 220
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -1
Query: 299 GQGRNPFP*HIYLSTIFYYIFSHNIAAIAVL*FNHLKNTRQFLQP--R*HVVNNILNC 132
GQGRNPF H+ + + + F + +L + K+ + F P ++ N ILNC
Sbjct: 89 GQGRNPFIDHLEIIDLI-FAFLVGLPCHILLFYGLQKSKKVFFSPFLVFYMTNFILNC 145
>Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical
protein R107.4d protein.
Length = 817
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 573 HLLFSIPTLVHCITFKT*THVTCFENCPLHY 481
HL FSIP++ C+ + T + N HY
Sbjct: 366 HLGFSIPSISKCLGYPEGTDILLLSNTSTHY 396
>Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical
protein R107.4c protein.
Length = 816
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 573 HLLFSIPTLVHCITFKT*THVTCFENCPLHY 481
HL FSIP++ C+ + T + N HY
Sbjct: 366 HLGFSIPSISKCLGYPEGTDILLLSNTSTHY 396
>Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical
protein R107.4b protein.
Length = 820
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 573 HLLFSIPTLVHCITFKT*THVTCFENCPLHY 481
HL FSIP++ C+ + T + N HY
Sbjct: 366 HLGFSIPSISKCLGYPEGTDILLLSNTSTHY 396
>Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical
protein R107.4a protein.
Length = 754
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 573 HLLFSIPTLVHCITFKT*THVTCFENCPLHY 481
HL FSIP++ C+ + T + N HY
Sbjct: 366 HLGFSIPSISKCLGYPEGTDILLLSNTSTHY 396
>Z81483-5|CAB03965.1| 104|Caenorhabditis elegans Hypothetical
protein C43D7.8 protein.
Length = 104
Score = 27.1 bits (57), Expect = 9.9
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +3
Query: 282 RISTLSNVLMF--LSNNVD-TVEKQVERAEGFFGVQNDNKLKSLLKPFIKRGRETIPDNS 452
R T+ ++ F +S + T E +A+ F+ ++ S+ F++ ++ IP N
Sbjct: 19 RCLTMEQIIKFSLISESTKRTAESLNLQADPFWICFGESVHISVHANFVENYQQDIPWNP 78
Query: 453 LPPHHKIDLSSVMDNFQSM*HEFKF 527
+ ++DL +++D+FQS+ H KF
Sbjct: 79 V----EVDLRTLLDHFQSVLHTNKF 99
>U13644-1|AAB52683.1| 437|Caenorhabditis elegans Hypothetical
protein F56D2.5 protein.
Length = 437
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 582 YDIHLLFSIPTLVHCITFKT*THVTCFENCPLHY 481
YD + F HCI F+ +HV C ++C +Y
Sbjct: 182 YDCQVCFESQMGQHCIKFQPCSHVFC-KSCTFNY 214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,082,088
Number of Sequences: 27780
Number of extensions: 265042
Number of successful extensions: 746
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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