Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3h11
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    26   1.3  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       25   3.0  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   5.3  

>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 16/60 (26%), Positives = 32/60 (53%)
 Frame = +1

Query: 406 TVEIVSIPNQVLEIVEAEKAVDNVISMTEVSVTETIAKNSSFKIPKMPLVNSEVLKNAIE 585
           TVE+V+  +    +VEA    +NV++  +   ++ +   SS K P + +V    L+ A++
Sbjct: 45  TVEVVASTSVDSAVVEAVTGEENVMAAEDSVTSQPVESFSSSKEPAL-VVGGSKLQEALK 103


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 15/64 (23%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +1

Query: 400 KNTVEIVSIP-NQVLEIVEAEKAVDNVISMTEVSVTETIAKNSSFKIPKMPLVNSEVLKN 576
           +N    + +P N   ++V++ ++      + ++ VT+   K+ +   PKM + NS  LKN
Sbjct: 179 QNVTMYIFMPMNSTRQLVQSMQSKITAERVNDI-VTKMKMKSVTVMFPKMHISNSISLKN 237

Query: 577 AIEK 588
            +++
Sbjct: 238 VLQQ 241


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -1

Query: 696 YQRYLSQGSNVLSQLSGNIVIRVC 625
           Y  Y+ Q    L QLSG  V R C
Sbjct: 616 YSDYVLQEEGPLKQLSGKAVCRKC 639


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.130    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,840
Number of Sequences: 2352
Number of extensions: 10247
Number of successful extensions: 52
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)