Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3h09
         (347 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q26FJ5 Cluster: Hypothetical transmembrane protein; n=1...    31   4.1  
UniRef50_Q7RTC5 Cluster: Putative uncharacterized protein PY0006...    30   9.5  

>UniRef50_Q26FJ5 Cluster: Hypothetical transmembrane protein; n=1;
           Flavobacteria bacterium BBFL7|Rep: Hypothetical
           transmembrane protein - Flavobacteria bacterium BBFL7
          Length = 279

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +2

Query: 41  IWK*NGVRISTYHRYFS---VWSLLDYEIFNE*S*QQFFFYNCHADNDVLNATTRAVI 205
           IWK +G+R S + + FS   VW++L   I       QF +YN   D  V+    R V+
Sbjct: 116 IWKGHGLRYSPFFKLFSVSIVWAILIIAI------PQFLYYNTGVDTPVIIEFNRGVL 167


>UniRef50_Q7RTC5 Cluster: Putative uncharacterized protein PY00069;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY00069 - Plasmodium yoelii
           yoelii
          Length = 1072

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -3

Query: 150 KKNCCQDYSLNIS*SNKLQTLKYR**VEILTPFYFHMLRASFL 22
           KKN CQ +  N   +NK++ +KY    +I   +YF+ L  + +
Sbjct: 204 KKNLCQYFEKNKKETNKIRKIKYHAFDKIYINYYFNNLNKALI 246


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,028,797
Number of Sequences: 1657284
Number of extensions: 3797462
Number of successful extensions: 8191
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8191
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)