Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3h03
(743 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 28 0.11
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 1.3
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 5.3
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 5.3
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 5.3
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 22 7.0
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 22 7.0
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 21 9.2
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 21 9.2
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 21 9.2
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 9.2
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 27.9 bits (59), Expect = 0.11
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 272 YCHCDAHSYSPRVEQYKQLLEKEQKLCQDYEQLRKQMVSVTNDILDHP 415
Y H D+ Y P + +YK +E+++ + Q+ + S + +L+ P
Sbjct: 164 YHHMDSVEYKPEIMEYKPDVEEQRYKQVEISQMTEPSSSTKSYVLEGP 211
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 24.2 bits (50), Expect = 1.3
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Frame = +2
Query: 185 PFPKPIVGKPCEPPTPSGAPPAQRAPVAPYCHCDAH---SYSPRVEQYKQLLEK 337
P P + PP PS PP P AP + S + + Q +QLL++
Sbjct: 27 PHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISPASGIHQMQQLLQQ 80
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 336 KNRNYAKTMNSCGNRWSASQM 398
KNRNYA ++S ++ S+ M
Sbjct: 3 KNRNYALDVSSAASKTSSKVM 23
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 5.3
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 668 KTWFSEFPGRTEYMDTYS 721
++W S+FP R++ +D S
Sbjct: 402 RSWLSKFPTRSKRIDVIS 419
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 5.3
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 668 KTWFSEFPGRTEYMDTYS 721
++W S+FP R++ +D S
Sbjct: 402 RSWLSKFPTRSKRIDVIS 419
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 287 HHNDSRAQLELVERVELL 234
HH+D+R LV R +LL
Sbjct: 122 HHDDARPHTYLVTRQKLL 139
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 380 MVSVTNDILDHPCDDLDSKMTTMYQATYKKRS 475
+V + ++ HP D + T Y+A Y K S
Sbjct: 151 IVGIVMVLIIHPGDPRIKSVVTAYKADYTKIS 182
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 21.4 bits (43), Expect = 9.2
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 347 ISVLFRAAVCIVLLSVNRNEHHNDSRAQLELVERVELLTALE 222
+ VLF AA I H DS+ + + V+ V +L ++E
Sbjct: 4 LGVLFIAAWFIACTHSFPGAHDEDSKEERKNVDTVLVLPSIE 45
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 21.4 bits (43), Expect = 9.2
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 347 ISVLFRAAVCIVLLSVNRNEHHNDSRAQLELVERVELLTALE 222
+ VLF AA I H DS+ + + V+ V +L ++E
Sbjct: 4 LGVLFIAAWFIACTHSFPGAHDEDSKEERKNVDTVLVLPSIE 45
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 21.4 bits (43), Expect = 9.2
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 347 ISVLFRAAVCIVLLSVNRNEHHNDSRAQLELVERVELLTALE 222
+ VLF AA I H DS+ + + V+ V +L ++E
Sbjct: 4 LGVLFIAAWFIACTHSFPGAHDEDSKEERKNVDTVLVLPSIE 45
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +2
Query: 176 YQWPFPKPIVGKPCEPPTPSGAP 244
Y+ P P +G PTP+G P
Sbjct: 110 YRSASPSPGMGHMGHTPTPNGHP 132
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,099
Number of Sequences: 438
Number of extensions: 4173
Number of successful extensions: 39
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -