Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte3g19
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50029-9|CAA90345.4| 1012|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z50028-6|CAA90339.4| 1012|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin ... 31 0.77
AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin ... 30 1.3
L10990-4|ABB88238.1| 438|Caenorhabditis elegans Hypothetical pr... 30 1.8
L10990-3|ABB88237.1| 505|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 29 2.4
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 29 2.4
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 29 2.4
Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical pr... 29 3.1
X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogen... 29 3.1
U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin st... 29 3.1
AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein. 29 3.1
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 29 3.1
AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans hom... 29 3.1
AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans hom... 29 3.1
X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin pr... 28 7.2
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 27 9.5
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 27 9.5
U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin st... 27 9.5
U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin st... 27 9.5
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 27 9.5
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z50029-9|CAA90345.4| 1012|Caenorhabditis elegans Hypothetical
protein F46F6.2 protein.
Length = 1012
Score = 50.4 bits (115), Expect = 1e-06
Identities = 40/167 (23%), Positives = 78/167 (46%)
Frame = +1
Query: 154 ELKDVIRREIRKELKIKEGAEKLREVATDRRSLSDVANIVKKANIKLNELKSDXXXXXXX 333
EL+ VIR+++ K+LKIK G +++ + +DRR + + N ++ +L+ D
Sbjct: 74 ELRSVIRKDLTKKLKIKSGYSRIKLITSDRRQSEFLRYELSDLNEQIADLQEDLQALEMY 133
Query: 334 XXXXRGQSTPTSPEDLSYDEEIILASEAAQQQRQLGEATTDRKLASLEKQLNIELKVKQG 513
++DE+++ + G + KL L+ +L ELKVK+G
Sbjct: 134 NSG-------------AFDEDVMYLDNLEDCDVENGPPS---KLVILQLELEKELKVKRG 177
Query: 514 AENMXXXXXXXXXXRDKKLLAEAHQMLADSKVKIEYLKLRISKLTKQ 654
E K+ ++ +L DS+ KI L+++I +L+++
Sbjct: 178 LEQFLRGAPD-----KSKVHGDSQSLLDDSRAKIAMLRMQIERLSQE 219
Score = 32.3 bits (70), Expect = 0.33
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +1
Query: 115 ECIPEIALPSKLEELKDVIRREIRKELKIKEGAEKLREVATDRRSL-SDVANIVKKANIK 291
+C E PSKL +++ E+ KELK+K G E+ A D+ + D +++ + K
Sbjct: 150 DCDVENGPPSKLV----ILQLELEKELKVKRGLEQFLRGAPDKSKVHGDSQSLLDDSRAK 205
Query: 292 LNELKSDXXXXXXXXXXXRGQSTPTSPEDLSYDEEII 402
+ L+ G+ P + +L+ D+ II
Sbjct: 206 IAMLRMQIERLSQEAPAVEGE--PKTKVELAIDDLII 240
>Z50028-6|CAA90339.4| 1012|Caenorhabditis elegans Hypothetical
protein F46F6.2 protein.
Length = 1012
Score = 50.4 bits (115), Expect = 1e-06
Identities = 40/167 (23%), Positives = 78/167 (46%)
Frame = +1
Query: 154 ELKDVIRREIRKELKIKEGAEKLREVATDRRSLSDVANIVKKANIKLNELKSDXXXXXXX 333
EL+ VIR+++ K+LKIK G +++ + +DRR + + N ++ +L+ D
Sbjct: 74 ELRSVIRKDLTKKLKIKSGYSRIKLITSDRRQSEFLRYELSDLNEQIADLQEDLQALEMY 133
Query: 334 XXXXRGQSTPTSPEDLSYDEEIILASEAAQQQRQLGEATTDRKLASLEKQLNIELKVKQG 513
++DE+++ + G + KL L+ +L ELKVK+G
Sbjct: 134 NSG-------------AFDEDVMYLDNLEDCDVENGPPS---KLVILQLELEKELKVKRG 177
Query: 514 AENMXXXXXXXXXXRDKKLLAEAHQMLADSKVKIEYLKLRISKLTKQ 654
E K+ ++ +L DS+ KI L+++I +L+++
Sbjct: 178 LEQFLRGAPD-----KSKVHGDSQSLLDDSRAKIAMLRMQIERLSQE 219
Score = 32.3 bits (70), Expect = 0.33
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Frame = +1
Query: 115 ECIPEIALPSKLEELKDVIRREIRKELKIKEGAEKLREVATDRRSL-SDVANIVKKANIK 291
+C E PSKL +++ E+ KELK+K G E+ A D+ + D +++ + K
Sbjct: 150 DCDVENGPPSKLV----ILQLELEKELKVKRGLEQFLRGAPDKSKVHGDSQSLLDDSRAK 205
Query: 292 LNELKSDXXXXXXXXXXXRGQSTPTSPEDLSYDEEII 402
+ L+ G+ P + +L+ D+ II
Sbjct: 206 IAMLRMQIERLSQEAPAVEGE--PKTKVELAIDDLII 240
>AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 4 protein.
Length = 1603
Score = 31.1 bits (67), Expect = 0.77
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 58 DYIRHPVLHELGVKYGIKTECIP-EIALPSKLEELKDVIRREIRKELKIKEGAEKLREV 231
D R P+ HE ++ ++TE + +PS L +L++ RE++ L K G+ K E+
Sbjct: 1110 DARRSPIEHE-NKEWTLRTELLAARPQMPSSLRQLREQPHREVQLALNAKWGSSKKSEI 1167
>AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 3 protein.
Length = 1603
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 58 DYIRHPVLHELGVKYGIKTECIP-EIALPSKLEELKDVIRREIRKELKIKEGAEKLREV 231
D R P+ HE ++ ++TE + +PS L +L++ RE++ L K G+ K E+
Sbjct: 1110 DARRSPMEHE-NKEWTLRTELLAARPQMPSSLRQLREQPHREVQLALNAKWGSSKKSEI 1167
>L10990-4|ABB88238.1| 438|Caenorhabditis elegans Hypothetical
protein C30A5.10b protein.
Length = 438
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +1
Query: 130 IALPSKLEELKDVIRREIRKELKIKEGAEKLREVATDRRSLSDVANIVKKANIKLNEL 303
+ + + LE K + + KE+ + GA + +TD RS++D+ ++ NI+ ++L
Sbjct: 206 VRMAAFLEAQKTINESNLLKEIGVDIGAIIVDSCSTDLRSVADLYELLSGTNIQKSDL 263
>L10990-3|ABB88237.1| 505|Caenorhabditis elegans Hypothetical
protein C30A5.10a protein.
Length = 505
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +1
Query: 130 IALPSKLEELKDVIRREIRKELKIKEGAEKLREVATDRRSLSDVANIVKKANIKLNEL 303
+ + + LE K + + KE+ + GA + +TD RS++D+ ++ NI+ ++L
Sbjct: 206 VRMAAFLEAQKTINESNLLKEIGVDIGAIIVDSCSTDLRSVADLYELLSGTNIQKSDL 263
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 130 IALPSKLEELKDVIRREIRKELKIKEGAEKLREVAT 237
I++ S+LEELK + R IR E + + EKL+ T
Sbjct: 779 ISVKSQLEELKTEVERLIRSEEEKTQEIEKLKSAVT 814
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 130 IALPSKLEELKDVIRREIRKELKIKEGAEKLREVAT 237
I++ S+LEELK + R IR E + + EKL+ T
Sbjct: 781 ISVKSQLEELKTEVERLIRSEEEKTQEIEKLKSAVT 816
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 130 IALPSKLEELKDVIRREIRKELKIKEGAEKLREVAT 237
I++ S+LEELK + R IR E + + EKL+ T
Sbjct: 781 ISVKSQLEELKTEVERLIRSEEEKTQEIEKLKSAVT 816
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 29.5 bits (63), Expect = 2.4
Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 6/177 (3%)
Frame = +1
Query: 142 SKLEELKDVIRREIRKELKIKEGAEKLREV-ATDRRSLSDVANIVKKANIKL----NELK 306
S+ LK + R + + L++KE E+LR++ +D + + + N KL +EL+
Sbjct: 84 SEENNLKILNRDLVAENLELKEMKEELRKIWLSDSKKFQEALTRISDENTKLQKDCHELE 143
Query: 307 SDXXXXXXXXXXXRGQSTPTSPEDLSYDEEI-ILASEAAQQQRQLGEATTDRKLASLEKQ 483
S + T E+ ++ I L E ++ + + +RK E
Sbjct: 144 SIRQCAQFALDNCNEELEKTQTENEEHESRIETLEREVCEKDIAMKDIV-ERKD---EIS 199
Query: 484 LNIELKVKQGAENMXXXXXXXXXXRDKKLLAEAHQMLADSKVKIEYLKLRISKLTKQ 654
L +EL+ K+ + + L + HQM + KVK ++ I+KL Q
Sbjct: 200 LQLELQTKEFTSALNDLMYGR-----EDTLKQIHQMKENWKVKQNEFEVEITKLKSQ 251
>Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical
protein F32H2.3 protein.
Length = 824
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 275 LTILATSDRDLRSVATSRSFSAPSFILS 192
LT + + DLRS A+SRS S P+ ++S
Sbjct: 69 LTTIEEKNEDLRSAASSRSASRPASVMS 96
>X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogenin
protein.
Length = 1603
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 58 DYIRHPVLHELGVKYGIKTECIP-EIALPSKLEELKDVIRREIRKELKIKEGAEKLREVA 234
D R P+ HE ++ ++TE + +PS L +L++ RE++ K G+ K E+
Sbjct: 1110 DARRSPMEHE-NKEWTLRTELLAARPQMPSSLRQLREQPHREVQLAFNAKWGSSKKSEIT 1168
Query: 235 TD 240
+
Sbjct: 1169 VN 1170
>U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 5 protein.
Length = 1603
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 58 DYIRHPVLHELGVKYGIKTECIP-EIALPSKLEELKDVIRREIRKELKIKEGAEKLREVA 234
D R P+ HE ++ ++TE + +PS L +L++ RE++ K G+ K E+
Sbjct: 1110 DARRSPMEHE-NKEWTLRTELLAARPQMPSSLRQLREQPHREVQLAFNAKWGSSKKSEIT 1168
Query: 235 TD 240
+
Sbjct: 1169 VN 1170
>AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein.
Length = 824
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 275 LTILATSDRDLRSVATSRSFSAPSFILS 192
LT + + DLRS A+SRS S P+ ++S
Sbjct: 69 LTTIEEKNEDLRSAASSRSASRPASVMS 96
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 29.1 bits (62), Expect = 3.1
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 7/186 (3%)
Frame = +1
Query: 118 CIPEIALPSKLEELK--DVIRREIRKELKIKEGAEKL-REVATDRRSLSDVANI---VKK 279
C ++LP LK + + + K K E E+L R++ L D+ V+K
Sbjct: 89 CKSIVSLPDPKSLLKGAEAWKNDAEKTQKAVEEREELKRQLIKVNNELEDLRGKDVKVRK 148
Query: 280 ANIKLNELKSDXXXXXXXXXXXRGQSTPTSPEDLSYDEEIILASEAAQQQRQLGEATTDR 459
KL +L+S+ + D E+I E ++Q ++ E D
Sbjct: 149 LKDKLAKLESEQDIFIENAVNEVEKKAEQELNDRL--TELIAEKEKMKEQNEILEKNMD- 205
Query: 460 KLASLEKQLNIELKV-KQGAENMXXXXXXXXXXRDKKLLAEAHQMLADSKVKIEYLKLRI 636
L S K + +L++ KQ E + + L+ A + LAD+K KI +L+ R+
Sbjct: 206 SLESKNKDIQRKLEIAKQTVEQKDGL--------ENEQLSIAMKDLADAKHKIVFLEERV 257
Query: 637 SKLTKQ 654
S+L +
Sbjct: 258 SQLENE 263
>AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform b protein.
Length = 619
Score = 29.1 bits (62), Expect = 3.1
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 7/186 (3%)
Frame = +1
Query: 118 CIPEIALPSKLEELK--DVIRREIRKELKIKEGAEKL-REVATDRRSLSDVANI---VKK 279
C ++LP LK + + + K K E E+L R++ L D+ V+K
Sbjct: 89 CKSIVSLPDPKSLLKGAEAWKNDAEKTQKAVEEREELKRQLIKVNNELEDLRGKDVKVRK 148
Query: 280 ANIKLNELKSDXXXXXXXXXXXRGQSTPTSPEDLSYDEEIILASEAAQQQRQLGEATTDR 459
KL +L+S+ + D E+I E ++Q ++ E D
Sbjct: 149 LKDKLAKLESEQDIFIENAVNEVEKKAEQELNDRL--TELIAEKEKMKEQNEILEKNMD- 205
Query: 460 KLASLEKQLNIELKV-KQGAENMXXXXXXXXXXRDKKLLAEAHQMLADSKVKIEYLKLRI 636
L S K + +L++ KQ E + + L+ A + LAD+K KI +L+ R+
Sbjct: 206 SLESKNKDIQRKLEIAKQTVEQKDGL--------ENEQLSIAMKDLADAKHKIVFLEERV 257
Query: 637 SKLTKQ 654
S+L +
Sbjct: 258 SQLENE 263
>AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform c protein.
Length = 621
Score = 29.1 bits (62), Expect = 3.1
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 7/186 (3%)
Frame = +1
Query: 118 CIPEIALPSKLEELK--DVIRREIRKELKIKEGAEKL-REVATDRRSLSDVANI---VKK 279
C ++LP LK + + + K K E E+L R++ L D+ V+K
Sbjct: 89 CKSIVSLPDPKSLLKGAEAWKNDAEKTQKAVEEREELKRQLIKVNNELEDLRGKDVKVRK 148
Query: 280 ANIKLNELKSDXXXXXXXXXXXRGQSTPTSPEDLSYDEEIILASEAAQQQRQLGEATTDR 459
KL +L+S+ + D E+I E ++Q ++ E D
Sbjct: 149 LKDKLAKLESEQDIFIENAVNEVEKKAEQELNDRL--TELIAEKEKMKEQNEILEKNMD- 205
Query: 460 KLASLEKQLNIELKV-KQGAENMXXXXXXXXXXRDKKLLAEAHQMLADSKVKIEYLKLRI 636
L S K + +L++ KQ E + + L+ A + LAD+K KI +L+ R+
Sbjct: 206 SLESKNKDIQRKLEIAKQTVEQKDGL--------ENEQLSIAMKDLADAKHKIVFLEERV 257
Query: 637 SKLTKQ 654
S+L +
Sbjct: 258 SQLENE 263
>X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin
protein.
Length = 1613
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +1
Query: 67 RHPVLHELGVKYGIKTECI---PEIALPSKLEELKDVIRREIRKELKIKEGAEKLREVAT 237
R P+L E ++ ++++ + PE +PS L +L+D RE++ L G++K EV
Sbjct: 1115 RSPILEETK-EWTVRSQLLVVRPE--MPSSLRQLRDQPHREVQLSLTSTWGSQKKSEVTV 1171
Query: 238 D 240
+
Sbjct: 1172 N 1172
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 136 LPSKLEELKDVIRREIRKELKIKEGAEKLREVATD 240
L + LKD + +E K+ +++EGAE+L + D
Sbjct: 868 LQETVATLKDTVVQEEEKKRQLQEGAERLNKETAD 902
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 136 LPSKLEELKDVIRREIRKELKIKEGAEKLREVATD 240
L + LKD + +E K+ +++EGAE+L + D
Sbjct: 868 LQETVATLKDTVVQEEEKKRQLQEGAERLNKETAD 902
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain
2 protein.
Length = 1947
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 136 LPSKLEELKDVIRREIRKELKIKEGAEKLREVATD 240
L + LKD + +E K+ +++EGAE+L + D
Sbjct: 868 LQETVATLKDTVVQEEEKKRQLQEGAERLNKETAD 902
>U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
b protein.
Length = 1558
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +1
Query: 67 RHPVLHELGVKYGIKTECI---PEIALPSKLEELKDVIRREIRKELKIKEGAEKLREVAT 237
R P+L E ++ ++++ + PE +PS L +L+D RE++ L G++K EV
Sbjct: 1115 RSPILEETK-EWTLRSQLLVVRPE--MPSSLRQLRDQPHREVQLSLTSTWGSQKKSEVTV 1171
Query: 238 D 240
+
Sbjct: 1172 N 1172
>U56966-5|AAA98720.1| 1613|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
a protein.
Length = 1613
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +1
Query: 67 RHPVLHELGVKYGIKTECI---PEIALPSKLEELKDVIRREIRKELKIKEGAEKLREVAT 237
R P+L E ++ ++++ + PE +PS L +L+D RE++ L G++K EV
Sbjct: 1115 RSPILEETK-EWTLRSQLLVVRPE--MPSSLRQLRDQPHREVQLSLTSTWGSQKKSEVTV 1171
Query: 238 D 240
+
Sbjct: 1172 N 1172
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 27.5 bits (58), Expect = 9.5
Identities = 24/112 (21%), Positives = 49/112 (43%)
Frame = +1
Query: 127 EIALPSKLEELKDVIRREIRKELKIKEGAEKLREVATDRRSLSDVANIVKKANIKLNELK 306
EIA +++ E K V R I + LK + +EK+ E A + + + +KA K E++
Sbjct: 893 EIAEKAQISEKKPVNRLVIDEVLKSPQKSEKIPEKAQEIEEIEESPKKSEKAPEKPQEIQ 952
Query: 307 SDXXXXXXXXXXXRGQSTPTSPEDLSYDEEIILASEAAQQQRQLGEATTDRK 462
+ + P P+++ + + Q+ Q E T++++
Sbjct: 953 E---------IPKKSEKAPEKPQEIEKSPKKSEKRQEIQEIPQKSEKTSEKR 995
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 27.5 bits (58), Expect = 9.5
Identities = 24/112 (21%), Positives = 49/112 (43%)
Frame = +1
Query: 127 EIALPSKLEELKDVIRREIRKELKIKEGAEKLREVATDRRSLSDVANIVKKANIKLNELK 306
EIA +++ E K V R I + LK + +EK+ E A + + + +KA K E++
Sbjct: 891 EIAEKAQISEKKPVNRLVIDEVLKSPQKSEKIPEKAQEIEEIEESPKKSEKAPEKPQEIQ 950
Query: 307 SDXXXXXXXXXXXRGQSTPTSPEDLSYDEEIILASEAAQQQRQLGEATTDRK 462
+ + P P+++ + + Q+ Q E T++++
Sbjct: 951 E---------IPKKSEKAPEKPQEIEKSPKKSEKRQEIQEIPQKSEKTSEKR 993
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.311 0.129 0.341
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,173,399
Number of Sequences: 27780
Number of extensions: 238022
Number of successful extensions: 755
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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