Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3g03
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   2.3  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   4.1  
AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    23   7.2  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +3

Query: 417 NSIFDCDNADME--VIQALMNLNEHSTKIE-FIYENILHWN 530
           NSIF+ D ADME  V+    N +E + +    + +N LH N
Sbjct: 563 NSIFEIDLADMERLVLLEPRNFDEQTGRARVLLNDNPLHCN 603


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/43 (23%), Positives = 21/43 (48%)
 Frame = -3

Query: 509 INEFYFCTMFIQVHQSLDHFHISIITVEN*IYTHRRLSVSFKF 381
           +N  +FC+ +      L+ FH+ +  +   +  HR L ++  F
Sbjct: 77  VNGVFFCSCYAPPSWELERFHVMLDNLVAELDGHRPLVIAGDF 119


>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +3

Query: 636 ERILLNKCHEIISQSNS 686
           ++++L KC E++S SNS
Sbjct: 293 QQLVLPKCDELLSNSNS 309


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,388
Number of Sequences: 2352
Number of extensions: 12309
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)