Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3f23
         (717 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    25   0.46 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.1  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.1  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   4.3  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   5.7  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   5.7  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   5.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   5.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.7  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = -3

Query: 493 LFVVLITMHLSSLFALIEYVSIGYGRFLILHSKFILVFLL 374
           LF  L+ + ++  + LIE  + GY  F++L   +I++ L+
Sbjct: 275 LFSCLLHLVVTPYYLLIEVCNAGYLPFILLQVAWIVLHLI 314



 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 700 GFYNH*VCP*LVLPSLILHTIPSPCRVVVEV 608
           GFY   V   L+L S +LH + +P  +++EV
Sbjct: 265 GFYG--VHTLLILFSCLLHLVVTPYYLLIEV 293


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 339 EITECKDQPQVFRRNTRINLEWRIRNLPYPIETY 440
           +I +  ++ Q+   N  +NLEW   NL +    Y
Sbjct: 39  QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEY 72


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 339 EITECKDQPQVFRRNTRINLEWRIRNLPYPIETY 440
           +I +  ++ Q+   N  +NLEW   NL +    Y
Sbjct: 39  QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEY 72


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 339 EITECKDQPQVFRRNTRINLEWRIRNLPYPIETY 440
           +I +  ++ Q+   N  +NLEW   NL +    Y
Sbjct: 39  QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEY 72


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 493 LFVVLITMHLSSLFALIEYVSIGYGRFLILH 401
           L  + I +     F  IE+VSI   RF+IL+
Sbjct: 163 LLFIFIVVKSGVAFQTIEFVSIIRNRFVILN 193


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 478 LEQQTKNTLKSLKYLNLRG 534
           LE++    LKSLK LNL+G
Sbjct: 131 LERRAFMNLKSLKRLNLKG 149


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 547 IFKFSLSSSGILNFLKYFLFVVLITMHL 464
           IF+F   + G   F  +FLF ++I M+L
Sbjct: 656 IFRFRADNPGYWLFHCHFLFHIVIGMNL 683


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -3

Query: 538 FSLSSSGILNFLKYFLFVV 482
           FS++   IL+F+ YF+F++
Sbjct: 384 FSITRGLILSFVDYFVFLL 402


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -2

Query: 533 PLKFRYFKLFKVFFVCCSNNYAPFIIVCTNRICFNWVW 420
           PL      L++ FF C +     F  +  N IC    W
Sbjct: 296 PLSLHGQLLWREFFYCAATKNPNFDKMIGNPICVQIPW 333


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -1

Query: 315 HQVWDHQFLHAIFLHHQVFLSPSKLYVIKLVYLH 214
           H+V+ H  +H     H++    +  + IKL +LH
Sbjct: 82  HKVFQHLMIHRPNWWHELETKFNPHHEIKLQHLH 115


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = -3

Query: 481 LITMHLSSLFAL---IEYVSIGYGRFLILHSKFILVFLL 374
           LI ++ + +F L   +++V      ++ L+S+FIL FLL
Sbjct: 112 LIHVYYTVVFTLLLGVDFVKEYAFEYIQLYSQFILYFLL 150


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = -3

Query: 481 LITMHLSSLFAL---IEYVSIGYGRFLILHSKFILVFLL 374
           LI ++ + +F L   +++V      ++ L+S+FIL FLL
Sbjct: 112 LIHVYYTVVFTLLLGVDFVKEYAFEYIQLYSQFILYFLL 150


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = -3

Query: 481 LITMHLSSLFAL---IEYVSIGYGRFLILHSKFILVFLL 374
           LI ++ + +F L   +++V      ++ L+S+FIL FLL
Sbjct: 432 LIHVYYTVVFTLLLGVDFVKEYAFEYIQLYSQFILYFLL 470


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,297
Number of Sequences: 336
Number of extensions: 3605
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)