Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte3f23
         (717 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    24   5.4  
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    23   9.5  
AF525673-2|AAM82610.1|   58|Anopheles gambiae cecropin CecA prot...    23   9.5  
AF200686-1|AAF22649.1|   58|Anopheles gambiae cecropin precursor...    23   9.5  

>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 339 EITECKDQPQVFRRNTRINLEWRIRNLPYPIETY 440
           +I +  ++ Q+   N  +NLEW   NL +    Y
Sbjct: 59  QIIDVDEKNQILTTNAWLNLEWNDYNLRWNDSEY 92


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 649 LHTIPSPCRVVVEVSWYIIINVLK**EDCI 560
           LH     C++   VSW I +N+     DCI
Sbjct: 143 LHQNNRLCKIERRVSWVIGVNITTLELDCI 172


>AF525673-2|AAM82610.1|   58|Anopheles gambiae cecropin CecA
           protein.
          Length = 58

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 514 LNFLKYFLFVVLITMHLSS 458
           +NF K F+FVVL  + L S
Sbjct: 1   MNFSKIFIFVVLAVLLLCS 19


>AF200686-1|AAF22649.1|   58|Anopheles gambiae cecropin precursor
           protein.
          Length = 58

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 514 LNFLKYFLFVVLITMHLSS 458
           +NF K F+FVVL  + L S
Sbjct: 1   MNFSKIFIFVVLAVLLLCS 19


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,565
Number of Sequences: 2352
Number of extensions: 13555
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)